BLASTX nr result

ID: Coptis25_contig00038777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038777
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314990.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002274818.2| PREDICTED: uncharacterized protein LOC100245...    71   1e-10
emb|CAN63315.1| hypothetical protein VITISV_021056 [Vitis vinifera]    71   1e-10
ref|XP_002519299.1| ATP binding protein, putative [Ricinus commu...    70   2e-10
emb|CBI25997.3| unnamed protein product [Vitis vinifera]               62   5e-08

>ref|XP_002314990.1| predicted protein [Populus trichocarpa] gi|222864030|gb|EEF01161.1|
            predicted protein [Populus trichocarpa]
          Length = 1851

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/68 (51%), Positives = 48/68 (70%)
 Frame = -3

Query: 412  FVQIQRGVEESLKEVYSDISSLVTDLLCFICNSRSSLEDIWSEIVEKEFYLSVVHQCYAG 233
            F Q+QR  EE  K +YSD+ S+V ++L FICNSRSS+EDI+SEI+E  F  S+++ C  G
Sbjct: 1142 FQQMQREEEERYKVIYSDVLSMVREMLSFICNSRSSVEDIFSEIMENGFARSIMYHCLVG 1201

Query: 232  NWLAKISS 209
              + KI S
Sbjct: 1202 ELVHKIPS 1209


>ref|XP_002274818.2| PREDICTED: uncharacterized protein LOC100245872 [Vitis vinifera]
          Length = 2270

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/66 (53%), Positives = 48/66 (72%)
 Frame = -3

Query: 412  FVQIQRGVEESLKEVYSDISSLVTDLLCFICNSRSSLEDIWSEIVEKEFYLSVVHQCYAG 233
            F+Q+Q+ VEE  +E+Y+ I S   ++L  ICNSR+SLEDI+SEIVEKEF L V++ CY G
Sbjct: 1511 FLQMQKDVEERFRELYTAIISTGREILYSICNSRTSLEDIYSEIVEKEFALFVLYHCYIG 1570

Query: 232  NWLAKI 215
                +I
Sbjct: 1571 EDFKRI 1576


>emb|CAN63315.1| hypothetical protein VITISV_021056 [Vitis vinifera]
          Length = 1842

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/66 (53%), Positives = 48/66 (72%)
 Frame = -3

Query: 412  FVQIQRGVEESLKEVYSDISSLVTDLLCFICNSRSSLEDIWSEIVEKEFYLSVVHQCYAG 233
            F+Q+Q+ VEE  +E+Y+ I S   ++L  ICNSR+SLEDI+SEIVEKEF L V++ CY G
Sbjct: 1076 FLQMQKDVEERFRELYTAIISTGREILYSICNSRTSLEDIYSEIVEKEFALFVLYHCYIG 1135

Query: 232  NWLAKI 215
                +I
Sbjct: 1136 EDFKRI 1141


>ref|XP_002519299.1| ATP binding protein, putative [Ricinus communis]
            gi|223541614|gb|EEF43163.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 2140

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/66 (53%), Positives = 49/66 (74%)
 Frame = -3

Query: 412  FVQIQRGVEESLKEVYSDISSLVTDLLCFICNSRSSLEDIWSEIVEKEFYLSVVHQCYAG 233
            F+Q++R V+++ K +YSD+  +  ++L FICNSRS LEDI+SEI+EKEF  SVV+QC  G
Sbjct: 1382 FLQMEREVDDNYKVLYSDLLCMGKEMLQFICNSRSLLEDIFSEIMEKEFAHSVVYQCVVG 1441

Query: 232  NWLAKI 215
                KI
Sbjct: 1442 EINHKI 1447


>emb|CBI25997.3| unnamed protein product [Vitis vinifera]
          Length = 1997

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/56 (55%), Positives = 43/56 (76%)
 Frame = -3

Query: 412  FVQIQRGVEESLKEVYSDISSLVTDLLCFICNSRSSLEDIWSEIVEKEFYLSVVHQ 245
            F+Q+Q+ VEE  +E+Y+ I S   ++L  ICNSR+SLEDI+SEIVEKEF L V+ +
Sbjct: 1281 FLQMQKDVEERFRELYTAIISTGREILYSICNSRTSLEDIYSEIVEKEFALFVLDE 1336


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