BLASTX nr result

ID: Coptis25_contig00038775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038775
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527799.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_002515665.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_002527799.1| conserved hypothetical protein [Ricinus communis]
           gi|223532834|gb|EEF34609.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 231

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/53 (58%), Positives = 43/53 (81%)
 Frame = +2

Query: 65  FLAFCRHHRKNRAFYAKRIPCNVVMMNSDGEMDILNKLPMIDNGDNTPGDSPA 223
           ++ F RH +K+R F+AKRIPCN+V+MN +GE D++   PMIDNG+ TPG+SPA
Sbjct: 159 WVIFDRHQKKDREFFAKRIPCNMVVMNENGEADMIRGQPMIDNGEFTPGESPA 211


>ref|XP_002515665.1| conserved hypothetical protein [Ricinus communis]
           gi|223545208|gb|EEF46717.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 245

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = +2

Query: 65  FLAFCRHHRKNRAFYAKRIPCNVVMMNSDGEMDILNKLPMIDNGDNTPGDSP 220
           F+   RH RKN+AF+A+R+P +VVMM S G++D+L     ID+ + TPG SP
Sbjct: 174 FVVLDRHLRKNKAFFAQRLPSSVVMMKSGGDVDMLKIRSSIDSSELTPGKSP 225


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