BLASTX nr result

ID: Coptis25_contig00038773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038773
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    89   3e-16
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002331231.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/116 (36%), Positives = 67/116 (57%)
 Frame = -1

Query: 358 FPMMNNIAVWNVRGINSLQKAKELNKIRLEHHLSLFGLIETKVKNDHFDFIRSLCCPGWY 179
           FPM+  I  WN+RG+N   K  EL+++  +  ++LFGL+ET+VK+ + D +  L    W 
Sbjct: 453 FPMI--IGCWNIRGLNDPIKHSELHRLIHQERITLFGLVETRVKDKNKDNVSQLLLRSWS 510

Query: 178 SFDNYDSDPHGRVWICWDPSYLEVKKIAESKQHIHVLVKVLSSLTMYEVSVIYASN 11
              NYD    GR+W+CW+   ++V     S + IHV V +L++   +  S+IY  N
Sbjct: 511 FLYNYDFSCRGRIWVCWNADTVKVDVFGMSDEAIHVSVTILATNISFNTSIIYGDN 566


>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/112 (39%), Positives = 64/112 (57%)
 Frame = -1

Query: 340 IAVWNVRGINSLQKAKELNKIRLEHHLSLFGLIETKVKNDHFDFIRSLCCPGWYSFDNYD 161
           +  WNVRG N   K KE+    L++   +  L+ET++K D F+ I S+    W   +NYD
Sbjct: 520 LVCWNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLNNYD 579

Query: 160 SDPHGRVWICWDPSYLEVKKIAESKQHIHVLVKVLSSLTMYEVSVIYASNEL 5
           S  +GR+W+ W+P+ L+VK IA S Q IH  V  L+S   +    +YA N L
Sbjct: 580 SAANGRIWVSWNPTVLDVKPIASSAQAIHCEVDNLTSSECFNFVAVYAFNTL 631


>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/110 (36%), Positives = 62/110 (56%)
 Frame = -1

Query: 340 IAVWNVRGINSLQKAKELNKIRLEHHLSLFGLIETKVKNDHFDFIRSLCCPGWYSFDNYD 161
           I  WN+RG+N   K  EL ++  +  ++LFGL+ET+VK+ + D +  L    W    NYD
Sbjct: 3   IGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYD 62

Query: 160 SDPHGRVWICWDPSYLEVKKIAESKQHIHVLVKVLSSLTMYEVSVIYASN 11
               GR+W+CW+   ++V     S Q IHV V +L++   +  S+IY  N
Sbjct: 63  FSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDN 112


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/116 (36%), Positives = 65/116 (56%)
 Frame = -1

Query: 358  FPMMNNIAVWNVRGINSLQKAKELNKIRLEHHLSLFGLIETKVKNDHFDFIRSLCCPGWY 179
            FPM+  I  WN+RG+N   K  EL ++  +  ++LFGL+ET+VK+ +   +  L    W 
Sbjct: 804  FPMI--IGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKYNVTQLLLRSWS 861

Query: 178  SFDNYDSDPHGRVWICWDPSYLEVKKIAESKQHIHVLVKVLSSLTMYEVSVIYASN 11
               NYD    GR+W+CW+   ++V     S Q IHV V +L++   +  S+IY  N
Sbjct: 862  FLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDN 917



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/104 (35%), Positives = 58/104 (55%)
 Frame = -1

Query: 322 RGINSLQKAKELNKIRLEHHLSLFGLIETKVKNDHFDFIRSLCCPGWYSFDNYDSDPHGR 143
           RG+N   K  EL ++  +  ++LFGL+ET+VK+ + D +  L    W    NYD    GR
Sbjct: 533 RGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVTQLLLRSWSFLYNYDFSCRGR 592

Query: 142 VWICWDPSYLEVKKIAESKQHIHVLVKVLSSLTMYEVSVIYASN 11
           +W+CW+   ++V     S Q IHV V +L++   +  S+IY  N
Sbjct: 593 IWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDN 636


>ref|XP_002331231.1| predicted protein [Populus trichocarpa] gi|222873417|gb|EEF10548.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/110 (34%), Positives = 61/110 (55%)
 Frame = -1

Query: 340 IAVWNVRGINSLQKAKELNKIRLEHHLSLFGLIETKVKNDHFDFIRSLCCPGWYSFDNYD 161
           I  WNVRG+N   K   L ++  +  ++LF L+ET+V++ + D +  L    W    NYD
Sbjct: 3   IGCWNVRGLNDPIKHSALRRLIHQERITLFALVETRVRHKNKDNVSQLLLRNWSFLYNYD 62

Query: 160 SDPHGRVWICWDPSYLEVKKIAESKQHIHVLVKVLSSLTMYEVSVIYASN 11
               GR+W+CW+   ++V  +  S Q IHV V +L++   +  S+IY  N
Sbjct: 63  FSCRGRIWVCWNADTVKVDVLGMSDQAIHVSVTILATNICFNTSIIYGDN 112


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