BLASTX nr result

ID: Coptis25_contig00038762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038762
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   171   4e-41
emb|CBI23999.3| unnamed protein product [Vitis vinifera]              171   4e-41
emb|CAN78307.1| hypothetical protein VITISV_005598 [Vitis vinifera]   169   2e-40
ref|XP_002515370.1| cysteine-type endopeptidase, putative [Ricin...   161   6e-38
ref|NP_001189593.1| ubiquitin carboxyl-terminal hydrolase 19 [Ar...   157   8e-37

>ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
           vinifera]
          Length = 940

 Score =  171 bits (434), Expect = 4e-41
 Identities = 77/92 (83%), Positives = 86/92 (93%)
 Frame = -2

Query: 276 GHKRKCRRNDWCFLCELEIHVERVRCSWQPFSPTNILSRLPNIGGNLGYGKQEDAHEFMR 97
           GH+R+CRRNDWCFLCE ++HVER   S QPFSP NILSRLP+IGGNLGYGKQEDAHEFMR
Sbjct: 228 GHRRQCRRNDWCFLCEFQVHVERASHSPQPFSPINILSRLPSIGGNLGYGKQEDAHEFMR 287

Query: 96  FAIDTMQSVCLDEFGGERTLHPSSQETTLIQY 1
           FAIDTMQSVCLDEFGGE+++HPSSQETTLIQ+
Sbjct: 288 FAIDTMQSVCLDEFGGEKSVHPSSQETTLIQH 319


>emb|CBI23999.3| unnamed protein product [Vitis vinifera]
          Length = 892

 Score =  171 bits (434), Expect = 4e-41
 Identities = 77/92 (83%), Positives = 86/92 (93%)
 Frame = -2

Query: 276 GHKRKCRRNDWCFLCELEIHVERVRCSWQPFSPTNILSRLPNIGGNLGYGKQEDAHEFMR 97
           GH+R+CRRNDWCFLCE ++HVER   S QPFSP NILSRLP+IGGNLGYGKQEDAHEFMR
Sbjct: 152 GHRRQCRRNDWCFLCEFQVHVERASHSPQPFSPINILSRLPSIGGNLGYGKQEDAHEFMR 211

Query: 96  FAIDTMQSVCLDEFGGERTLHPSSQETTLIQY 1
           FAIDTMQSVCLDEFGGE+++HPSSQETTLIQ+
Sbjct: 212 FAIDTMQSVCLDEFGGEKSVHPSSQETTLIQH 243


>emb|CAN78307.1| hypothetical protein VITISV_005598 [Vitis vinifera]
          Length = 494

 Score =  169 bits (428), Expect = 2e-40
 Identities = 76/92 (82%), Positives = 85/92 (92%)
 Frame = -2

Query: 276 GHKRKCRRNDWCFLCELEIHVERVRCSWQPFSPTNILSRLPNIGGNLGYGKQEDAHEFMR 97
           GH+R+CRRNDWCFLCE ++HVER   S  PFSP NILSRLP+IGGNLGYGKQEDAHEFMR
Sbjct: 246 GHRRQCRRNDWCFLCEFQVHVERASHSPXPFSPINILSRLPSIGGNLGYGKQEDAHEFMR 305

Query: 96  FAIDTMQSVCLDEFGGERTLHPSSQETTLIQY 1
           FAIDTMQSVCLDEFGGE+++HPSSQETTLIQ+
Sbjct: 306 FAIDTMQSVCLDEFGGEKSVHPSSQETTLIQH 337


>ref|XP_002515370.1| cysteine-type endopeptidase, putative [Ricinus communis]
           gi|223545314|gb|EEF46819.1| cysteine-type endopeptidase,
           putative [Ricinus communis]
          Length = 632

 Score =  161 bits (407), Expect = 6e-38
 Identities = 72/92 (78%), Positives = 82/92 (89%)
 Frame = -2

Query: 276 GHKRKCRRNDWCFLCELEIHVERVRCSWQPFSPTNILSRLPNIGGNLGYGKQEDAHEFMR 97
           GH+R+CRRNDWCFLCE ++HVER   S  PFSP +ILSRLPNIGGNLGYGKQEDAHEFMR
Sbjct: 207 GHQRECRRNDWCFLCEFQVHVERASKSSHPFSPMSILSRLPNIGGNLGYGKQEDAHEFMR 266

Query: 96  FAIDTMQSVCLDEFGGERTLHPSSQETTLIQY 1
           FAIDTMQSVCLDE+GGE+ + P+ QETTLIQ+
Sbjct: 267 FAIDTMQSVCLDEYGGEKAVDPAFQETTLIQH 298


>ref|NP_001189593.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
           gi|227206324|dbj|BAH57217.1| AT2G24640 [Arabidopsis
           thaliana] gi|330252514|gb|AEC07608.1| ubiquitin
           carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
          Length = 502

 Score =  157 bits (397), Expect = 8e-37
 Identities = 71/92 (77%), Positives = 79/92 (85%)
 Frame = -2

Query: 276 GHKRKCRRNDWCFLCELEIHVERVRCSWQPFSPTNILSRLPNIGGNLGYGKQEDAHEFMR 97
           GHKR+CRRNDWCFLCE E H++R   S  PFSP NI+SRLPNIGGNLGYG+QEDAHE MR
Sbjct: 36  GHKRECRRNDWCFLCEFENHLDRANYSRFPFSPMNIISRLPNIGGNLGYGRQEDAHELMR 95

Query: 96  FAIDTMQSVCLDEFGGERTLHPSSQETTLIQY 1
           FAID MQSVCLDEFGGE+ + P +QETTLIQY
Sbjct: 96  FAIDMMQSVCLDEFGGEKVVPPRAQETTLIQY 127


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