BLASTX nr result

ID: Coptis25_contig00038757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038757
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94840.1| unknown [Populus trichocarpa]                          184   1e-44
ref|XP_002322115.1| predicted protein [Populus trichocarpa] gi|2...   181   6e-44
ref|XP_003525184.1| PREDICTED: uncharacterized protein LOC100820...   179   2e-43
gb|ACU24427.1| unknown [Glycine max]                                  177   1e-42
ref|XP_002278985.1| PREDICTED: uncharacterized protein LOC100257...   176   3e-42

>gb|ABK94840.1| unknown [Populus trichocarpa]
          Length = 162

 Score =  184 bits (466), Expect = 1e-44
 Identities = 88/158 (55%), Positives = 116/158 (73%), Gaps = 1/158 (0%)
 Frame = +2

Query: 119 MGNTASCAPSXXXXXXXXXXXXDGRVQVFTKPIKAVEIMLEHPRHFVCDFSDLKVGHRIP 298
           MGN  SCAPS             G +Q++TKP+KA E+MLE+P  FVCD + LKVGHR+ 
Sbjct: 1   MGNATSCAPSIISNGVVKVLTNGGNLQIYTKPVKAAELMLENPGQFVCDSTSLKVGHRVH 60

Query: 299 GLAADEELERRHLYFILPIEMLYSVLVNDEMDALSCKASRVIKNGGANNIGKIFPIFSEF 478
           GL AD++LERR  YF+LP+E+LYSVL ++EM +L+ KA++ +K    NN GKIFP+ SEF
Sbjct: 61  GLLADDQLERRQFYFVLPMELLYSVLTHEEMSSLTYKATKALK---YNNFGKIFPVLSEF 117

Query: 479 CIFPSDSKALDSV-RDSNHVERYSKQRSWKPALDTILE 589
           CIFPS+ K +DS+  +   +ERYSKQRSWKPAL+TI+E
Sbjct: 118 CIFPSEGKTMDSMATEPQPMERYSKQRSWKPALETIVE 155


>ref|XP_002322115.1| predicted protein [Populus trichocarpa] gi|222869111|gb|EEF06242.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score =  181 bits (460), Expect = 6e-44
 Identities = 87/158 (55%), Positives = 115/158 (72%), Gaps = 1/158 (0%)
 Frame = +2

Query: 119 MGNTASCAPSXXXXXXXXXXXXDGRVQVFTKPIKAVEIMLEHPRHFVCDFSDLKVGHRIP 298
           MGN  SCAPS             G +Q++TKP+KA E+MLE+P  FVCD + LKVGHR+ 
Sbjct: 1   MGNATSCAPSIISNGVVKVLTNGGNLQIYTKPVKAAELMLENPGQFVCDSTSLKVGHRVH 60

Query: 299 GLAADEELERRHLYFILPIEMLYSVLVNDEMDALSCKASRVIKNGGANNIGKIFPIFSEF 478
           GL AD++LERR  YF+LP+E+LYSVL ++EM +L+ KA++ +K    NN  KIFP+ SEF
Sbjct: 61  GLLADDQLERRQFYFVLPMELLYSVLTHEEMSSLTYKATKALK---YNNFSKIFPVLSEF 117

Query: 479 CIFPSDSKALDSV-RDSNHVERYSKQRSWKPALDTILE 589
           CIFPS+ K +DS+  +   +ERYSKQRSWKPAL+TI+E
Sbjct: 118 CIFPSEGKTMDSMATEPQPMERYSKQRSWKPALETIVE 155


>ref|XP_003525184.1| PREDICTED: uncharacterized protein LOC100820022 [Glycine max]
          Length = 167

 Score =  179 bits (455), Expect = 2e-43
 Identities = 91/165 (55%), Positives = 117/165 (70%), Gaps = 8/165 (4%)
 Frame = +2

Query: 119 MGNTASCAPSXXXXXXXXXXXXDGRVQVFTKPIKAVEIMLEHPRHFVCDFSDLKVGHRIP 298
           MGN ASC PS            DGR++ +TKP++A E+MLE+   FVCD S LKVGHRI 
Sbjct: 1   MGNVASCTPSLTPNGVFKVLFLDGRLEAYTKPMRAAELMLEYSGQFVCDSSYLKVGHRIH 60

Query: 299 GLAADEELERRHLYFILPIEMLYSVLVNDEMDALSCKASRVIKNGGANNIGKIFPIFSEF 478
           GL AD++LE+R  YF+LPIE+L+SVL ++EM +L+ KASR  K+   NN+GKIFP+FSEF
Sbjct: 61  GLLADDQLEKRKFYFLLPIELLFSVLTHEEMSSLNYKASRATKHASFNNLGKIFPVFSEF 120

Query: 479 CIFPSDSKALDS-------VRDSN-HVERYSKQRSWKPALDTILE 589
           C+FPS+ K L+        VRD    V+RYSKQRSW+PAL+TI E
Sbjct: 121 CMFPSELKRLEEADNQLQVVRDPEPAVKRYSKQRSWRPALETIDE 165


>gb|ACU24427.1| unknown [Glycine max]
          Length = 167

 Score =  177 bits (449), Expect = 1e-42
 Identities = 90/165 (54%), Positives = 116/165 (70%), Gaps = 8/165 (4%)
 Frame = +2

Query: 119 MGNTASCAPSXXXXXXXXXXXXDGRVQVFTKPIKAVEIMLEHPRHFVCDFSDLKVGHRIP 298
           MGN ASC PS            DGR++ +TKP++A E+MLE+   FVCD S LKVGHRI 
Sbjct: 1   MGNVASCTPSLTPNGVFKVLFLDGRLEAYTKPMRAAELMLEYSGQFVCDSSYLKVGHRIH 60

Query: 299 GLAADEELERRHLYFILPIEMLYSVLVNDEMDALSCKASRVIKNGGANNIGKIFPIFSEF 478
           GL AD++LE+R  YF+LPIE+L+SVL ++EM +L+ KASR  K+   NN+GKIFP+FSEF
Sbjct: 61  GLLADDQLEKRKFYFLLPIELLFSVLTHEEMSSLNYKASRATKHASFNNLGKIFPVFSEF 120

Query: 479 CIFPSDSKALDS-------VRDSN-HVERYSKQRSWKPALDTILE 589
           C+FPS+ K L+        VRD    V+RYSKQR W+PAL+TI E
Sbjct: 121 CMFPSELKRLEEADNQLQVVRDPEPAVKRYSKQRFWRPALETIDE 165


>ref|XP_002278985.1| PREDICTED: uncharacterized protein LOC100257591 [Vitis vinifera]
          Length = 167

 Score =  176 bits (445), Expect = 3e-42
 Identities = 90/162 (55%), Positives = 121/162 (74%), Gaps = 5/162 (3%)
 Frame = +2

Query: 119 MGNTASCAPSXXXXXXXXXXXX-DGRVQVFTKPIKAVEIMLEHPRHFVCDFSDLKVGHRI 295
           MGN  SCAPS             DGR++V+T+P+KA E+ML+ P HFVC+ +DLKVG RI
Sbjct: 1   MGNATSCAPSILSNTGVVKVLSSDGRLEVYTRPVKAAELMLDKPGHFVCNSTDLKVGQRI 60

Query: 296 PGLAADEELERRHLYFILPIEMLYSVLVNDEMDALSCKASRVIKN-GGANNIGKIFPI-F 469
           PGL+ADEELE R LYF+LP+EMLYSVL ++E+ +LS KAS+V+K+   +NN G+IFP+  
Sbjct: 61  PGLSADEELELRQLYFLLPMEMLYSVLTHEEISSLSYKASKVVKHRSTSNNFGRIFPLGL 120

Query: 470 SEFCIFPSDSKALDSVRDSN--HVERYSKQRSWKPALDTILE 589
           S+FC+FPS++K L S    +   V+RYS+QRSW PAL+TI+E
Sbjct: 121 SDFCMFPSETKTLASPTTDHPEPVQRYSRQRSWSPALETIVE 162


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