BLASTX nr result

ID: Coptis25_contig00038746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038746
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT39312.2| Major Facilitator Superfamily protein [Solanum de...    89   3e-16
gb|AAT39311.2| POT family protein [Solanum demissum]                   89   3e-16
ref|XP_002312043.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
gb|AAT39313.2| POT family protein [Solanum demissum]                   85   5e-15
ref|XP_002528451.1| transporter, putative [Ricinus communis] gi|...    79   3e-13

>gb|AAT39312.2| Major Facilitator Superfamily protein [Solanum demissum]
          Length = 531

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/65 (67%), Positives = 50/65 (76%)
 Frame = +3

Query: 12  LRPLQRIGIGHVLNIAGMALSALIESRRLHKVRSHTLTHQPNSIVPMSAFWLVPPLAVVG 191
           L PLQRIGIGHV+ I  MA+SAL+ESRRL  VR+H L  Q N IVPMS FWLVP LA+ G
Sbjct: 368 LTPLQRIGIGHVITIISMAVSALVESRRLRIVRTHKLQGQNNDIVPMSVFWLVPQLALNG 427

Query: 192 VGEAF 206
           +GE F
Sbjct: 428 IGEGF 432


>gb|AAT39311.2| POT family protein [Solanum demissum]
          Length = 531

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/65 (67%), Positives = 50/65 (76%)
 Frame = +3

Query: 12  LRPLQRIGIGHVLNIAGMALSALIESRRLHKVRSHTLTHQPNSIVPMSAFWLVPPLAVVG 191
           L PLQRIGIGHV+ I  MA+SAL+ESRRL  VR+H L  Q N IVPMS FWLVP LA+ G
Sbjct: 368 LTPLQRIGIGHVITIISMAVSALVESRRLRIVRTHKLQGQNNDIVPMSVFWLVPQLALNG 427

Query: 192 VGEAF 206
           +GE F
Sbjct: 428 IGEGF 432


>ref|XP_002312043.1| predicted protein [Populus trichocarpa] gi|222851863|gb|EEE89410.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3   RRPLRPLQRIGIGHVLNIAGMALSALIESRRLHKVRSHTLTHQ-PNSIVPMSAFWLVPPL 179
           RR L+PLQ+IGIGHV+NI  M  SAL+E+RRL  VR+H L  + P S+VPMS  WLV PL
Sbjct: 393 RRSLKPLQQIGIGHVINIFAMVGSALVETRRLRVVRTHHLNGEPPGSVVPMSGLWLVVPL 452

Query: 180 AVVGVGEAF 206
            V+GVGEAF
Sbjct: 453 FVIGVGEAF 461


>gb|AAT39313.2| POT family protein [Solanum demissum]
          Length = 513

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/65 (63%), Positives = 50/65 (76%)
 Frame = +3

Query: 12  LRPLQRIGIGHVLNIAGMALSALIESRRLHKVRSHTLTHQPNSIVPMSAFWLVPPLAVVG 191
           L PLQR+GIGH L I+ MA+SAL+ESRRL   RSH L  Q ++IVPMS FWL+P LA+ G
Sbjct: 350 LTPLQRVGIGHALTISCMAVSALVESRRLRVARSHHLQGQKDAIVPMSVFWLLPQLALNG 409

Query: 192 VGEAF 206
           +GE F
Sbjct: 410 IGEGF 414


>ref|XP_002528451.1| transporter, putative [Ricinus communis]
           gi|223532127|gb|EEF33934.1| transporter, putative
           [Ricinus communis]
          Length = 502

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/65 (58%), Positives = 48/65 (73%)
 Frame = +3

Query: 12  LRPLQRIGIGHVLNIAGMALSALIESRRLHKVRSHTLTHQPNSIVPMSAFWLVPPLAVVG 191
           L PLQRIGIG V NI  +  SALIESRRLH VR+H LT++P S+VPM++ WLV P  ++G
Sbjct: 315 LTPLQRIGIGRVFNIIAIVASALIESRRLHIVRTHDLTNKPGSVVPMTSSWLVVPQLLLG 374

Query: 192 VGEAF 206
              +F
Sbjct: 375 FAHSF 379


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