BLASTX nr result
ID: Coptis25_contig00038714
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038714 (326 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF35897.1|AF229849_1 pectin methylesterase isoform alpha [Vi... 154 6e-36 ref|XP_002523113.1| Pectinesterase-3 precursor, putative [Ricinu... 152 2e-35 gb|AGG23325.1| pectin methylesterase 1 [Musa acuminata AAA Group] 149 3e-34 gb|ACQ85264.1| pectin methylesterase [Musa acuminata AAA Group] 149 3e-34 ref|XP_002322401.1| predicted protein [Populus trichocarpa] gi|2... 146 2e-33 >gb|AAF35897.1|AF229849_1 pectin methylesterase isoform alpha [Vigna radiata] Length = 277 Score = 154 bits (390), Expect = 6e-36 Identities = 69/91 (75%), Positives = 79/91 (86%) Frame = -1 Query: 323 YSRTVFINSQLDDLIDPAGWLEWDGNFALSTLYYGEYMNRGPGSNTTNRVKWPGYRVINS 144 YSRTVF+NS ++DLI+PAGWLEW+G FAL TLYYGEY NRGPG+NT+ RV WPGYRVI + Sbjct: 187 YSRTVFLNSLMEDLIEPAGWLEWNGTFALDTLYYGEYNNRGPGANTSGRVTWPGYRVITN 246 Query: 143 STEASQFTVANFLIGNEWLPSYNIPFFLGLS 51 STEASQFTV NF+ GNEWL SY IPFF GL+ Sbjct: 247 STEASQFTVQNFIQGNEWLNSYGIPFFSGLT 277 >ref|XP_002523113.1| Pectinesterase-3 precursor, putative [Ricinus communis] gi|223537675|gb|EEF39298.1| Pectinesterase-3 precursor, putative [Ricinus communis] Length = 557 Score = 152 bits (385), Expect = 2e-35 Identities = 69/91 (75%), Positives = 79/91 (86%) Frame = -1 Query: 323 YSRTVFINSQLDDLIDPAGWLEWDGNFALSTLYYGEYMNRGPGSNTTNRVKWPGYRVINS 144 YSRTVF+ S +DD++DP GWLEW+G FALSTLYYGEYMNRGPGSNT+ RV WPGYRVINS Sbjct: 467 YSRTVFLRSYIDDVVDPVGWLEWNGAFALSTLYYGEYMNRGPGSNTSARVTWPGYRVINS 526 Query: 143 STEASQFTVANFLIGNEWLPSYNIPFFLGLS 51 +TEASQFTV F+ G+EWL + IPFFLGLS Sbjct: 527 TTEASQFTVRPFIQGSEWLNATGIPFFLGLS 557 >gb|AGG23325.1| pectin methylesterase 1 [Musa acuminata AAA Group] Length = 566 Score = 149 bits (375), Expect = 3e-34 Identities = 67/91 (73%), Positives = 79/91 (86%) Frame = -1 Query: 323 YSRTVFINSQLDDLIDPAGWLEWDGNFALSTLYYGEYMNRGPGSNTTNRVKWPGYRVINS 144 YSRTV++ S LD LI+PAGWLEWDG+FALSTLYYGEYMNRGPGS+T NRVKWPGYRVINS Sbjct: 476 YSRTVYMQSLLDSLINPAGWLEWDGDFALSTLYYGEYMNRGPGSSTANRVKWPGYRVINS 535 Query: 143 STEASQFTVANFLIGNEWLPSYNIPFFLGLS 51 S EAS FTV +F+ G++WL S ++PF GL+ Sbjct: 536 SAEASMFTVESFIEGDQWLGSTSVPFTAGLN 566 >gb|ACQ85264.1| pectin methylesterase [Musa acuminata AAA Group] Length = 565 Score = 149 bits (375), Expect = 3e-34 Identities = 67/91 (73%), Positives = 79/91 (86%) Frame = -1 Query: 323 YSRTVFINSQLDDLIDPAGWLEWDGNFALSTLYYGEYMNRGPGSNTTNRVKWPGYRVINS 144 YSRTV++ S LD LI+PAGWLEWDG+FALSTLYYGEYMNRGPGS+T NRVKWPGYRVINS Sbjct: 475 YSRTVYMQSLLDSLINPAGWLEWDGDFALSTLYYGEYMNRGPGSSTANRVKWPGYRVINS 534 Query: 143 STEASQFTVANFLIGNEWLPSYNIPFFLGLS 51 S EAS FTV +F+ G++WL S ++PF GL+ Sbjct: 535 SAEASMFTVESFIEGDQWLGSTSVPFTAGLN 565 >ref|XP_002322401.1| predicted protein [Populus trichocarpa] gi|222869397|gb|EEF06528.1| predicted protein [Populus trichocarpa] Length = 517 Score = 146 bits (368), Expect = 2e-33 Identities = 64/90 (71%), Positives = 75/90 (83%) Frame = -1 Query: 323 YSRTVFINSQLDDLIDPAGWLEWDGNFALSTLYYGEYMNRGPGSNTTNRVKWPGYRVINS 144 YSRTVF+ + LD L+DPAGWLEWDGNFAL+TLYYGEY N GPG++T RVKW GYRVI S Sbjct: 428 YSRTVFLQTYLDSLVDPAGWLEWDGNFALNTLYYGEYRNSGPGASTRGRVKWRGYRVITS 487 Query: 143 STEASQFTVANFLIGNEWLPSYNIPFFLGL 54 STEAS+FTVANF+ G WLP+ +PF+ GL Sbjct: 488 STEASRFTVANFIAGRSWLPATGVPFYPGL 517