BLASTX nr result

ID: Coptis25_contig00038714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038714
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF35897.1|AF229849_1 pectin methylesterase isoform alpha [Vi...   154   6e-36
ref|XP_002523113.1| Pectinesterase-3 precursor, putative [Ricinu...   152   2e-35
gb|AGG23325.1| pectin methylesterase 1 [Musa acuminata AAA Group]     149   3e-34
gb|ACQ85264.1| pectin methylesterase [Musa acuminata AAA Group]       149   3e-34
ref|XP_002322401.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33

>gb|AAF35897.1|AF229849_1 pectin methylesterase isoform alpha [Vigna radiata]
          Length = 277

 Score =  154 bits (390), Expect = 6e-36
 Identities = 69/91 (75%), Positives = 79/91 (86%)
 Frame = -1

Query: 323 YSRTVFINSQLDDLIDPAGWLEWDGNFALSTLYYGEYMNRGPGSNTTNRVKWPGYRVINS 144
           YSRTVF+NS ++DLI+PAGWLEW+G FAL TLYYGEY NRGPG+NT+ RV WPGYRVI +
Sbjct: 187 YSRTVFLNSLMEDLIEPAGWLEWNGTFALDTLYYGEYNNRGPGANTSGRVTWPGYRVITN 246

Query: 143 STEASQFTVANFLIGNEWLPSYNIPFFLGLS 51
           STEASQFTV NF+ GNEWL SY IPFF GL+
Sbjct: 247 STEASQFTVQNFIQGNEWLNSYGIPFFSGLT 277


>ref|XP_002523113.1| Pectinesterase-3 precursor, putative [Ricinus communis]
           gi|223537675|gb|EEF39298.1| Pectinesterase-3 precursor,
           putative [Ricinus communis]
          Length = 557

 Score =  152 bits (385), Expect = 2e-35
 Identities = 69/91 (75%), Positives = 79/91 (86%)
 Frame = -1

Query: 323 YSRTVFINSQLDDLIDPAGWLEWDGNFALSTLYYGEYMNRGPGSNTTNRVKWPGYRVINS 144
           YSRTVF+ S +DD++DP GWLEW+G FALSTLYYGEYMNRGPGSNT+ RV WPGYRVINS
Sbjct: 467 YSRTVFLRSYIDDVVDPVGWLEWNGAFALSTLYYGEYMNRGPGSNTSARVTWPGYRVINS 526

Query: 143 STEASQFTVANFLIGNEWLPSYNIPFFLGLS 51
           +TEASQFTV  F+ G+EWL +  IPFFLGLS
Sbjct: 527 TTEASQFTVRPFIQGSEWLNATGIPFFLGLS 557


>gb|AGG23325.1| pectin methylesterase 1 [Musa acuminata AAA Group]
          Length = 566

 Score =  149 bits (375), Expect = 3e-34
 Identities = 67/91 (73%), Positives = 79/91 (86%)
 Frame = -1

Query: 323 YSRTVFINSQLDDLIDPAGWLEWDGNFALSTLYYGEYMNRGPGSNTTNRVKWPGYRVINS 144
           YSRTV++ S LD LI+PAGWLEWDG+FALSTLYYGEYMNRGPGS+T NRVKWPGYRVINS
Sbjct: 476 YSRTVYMQSLLDSLINPAGWLEWDGDFALSTLYYGEYMNRGPGSSTANRVKWPGYRVINS 535

Query: 143 STEASQFTVANFLIGNEWLPSYNIPFFLGLS 51
           S EAS FTV +F+ G++WL S ++PF  GL+
Sbjct: 536 SAEASMFTVESFIEGDQWLGSTSVPFTAGLN 566


>gb|ACQ85264.1| pectin methylesterase [Musa acuminata AAA Group]
          Length = 565

 Score =  149 bits (375), Expect = 3e-34
 Identities = 67/91 (73%), Positives = 79/91 (86%)
 Frame = -1

Query: 323 YSRTVFINSQLDDLIDPAGWLEWDGNFALSTLYYGEYMNRGPGSNTTNRVKWPGYRVINS 144
           YSRTV++ S LD LI+PAGWLEWDG+FALSTLYYGEYMNRGPGS+T NRVKWPGYRVINS
Sbjct: 475 YSRTVYMQSLLDSLINPAGWLEWDGDFALSTLYYGEYMNRGPGSSTANRVKWPGYRVINS 534

Query: 143 STEASQFTVANFLIGNEWLPSYNIPFFLGLS 51
           S EAS FTV +F+ G++WL S ++PF  GL+
Sbjct: 535 SAEASMFTVESFIEGDQWLGSTSVPFTAGLN 565


>ref|XP_002322401.1| predicted protein [Populus trichocarpa] gi|222869397|gb|EEF06528.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  146 bits (368), Expect = 2e-33
 Identities = 64/90 (71%), Positives = 75/90 (83%)
 Frame = -1

Query: 323 YSRTVFINSQLDDLIDPAGWLEWDGNFALSTLYYGEYMNRGPGSNTTNRVKWPGYRVINS 144
           YSRTVF+ + LD L+DPAGWLEWDGNFAL+TLYYGEY N GPG++T  RVKW GYRVI S
Sbjct: 428 YSRTVFLQTYLDSLVDPAGWLEWDGNFALNTLYYGEYRNSGPGASTRGRVKWRGYRVITS 487

Query: 143 STEASQFTVANFLIGNEWLPSYNIPFFLGL 54
           STEAS+FTVANF+ G  WLP+  +PF+ GL
Sbjct: 488 STEASRFTVANFIAGRSWLPATGVPFYPGL 517


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