BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038688
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175500.1| putative F-box protein [Arabidopsis thaliana] g...    60   1e-07
ref|XP_003599496.1| F-box [Medicago truncatula] gi|355488544|gb|...    57   2e-06
ref|XP_002891598.1| hypothetical protein ARALYDRAFT_474209 [Arab...    57   2e-06
ref|XP_002268486.1| PREDICTED: F-box/kelch-repeat protein At3g06...    57   2e-06
ref|NP_175213.1| putative F-box protein [Arabidopsis thaliana] g...    57   2e-06

>ref|NP_175500.1| putative F-box protein [Arabidopsis thaliana]
           gi|75268203|sp|Q9C6J3.1|FB52_ARATH RecName:
           Full=Putative F-box protein At1g50870
           gi|12321805|gb|AAG50947.1|AC079284_22 hypothetical
           protein [Arabidopsis thaliana]
           gi|332194475|gb|AEE32596.1| putative F-box protein
           [Arabidopsis thaliana]
          Length = 396

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = -1

Query: 277 IIESILTRLPVKSVLRFRCVSKPWRSLLDDPVFVDRHFTNLST-*KLYFSNNNNNKKAVF 101
           +I  IL RLPVKSVLRFRCVSK W S   DP F + +    ST   L     N +K  VF
Sbjct: 35  LILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEARSSTRPSLLMFFKNKDKLFVF 94

Query: 100 LYPHKSLNSLDLETSHSRVID 38
            +PH + NS +   S+S+ +D
Sbjct: 95  TFPHHNQNSKETH-SYSQHVD 114


>ref|XP_003599496.1| F-box [Medicago truncatula] gi|355488544|gb|AES69747.1| F-box
           [Medicago truncatula]
          Length = 370

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/89 (38%), Positives = 47/89 (52%)
 Frame = -1

Query: 277 IIESILTRLPVKSVLRFRCVSKPWRSLLDDPVFVDRHFTNLST*KLYFSNNNNNKKAVFL 98
           +I  IL RLPVKS++RF+CV K W +L+ DP F   HF +LST        + N+     
Sbjct: 13  LIIQILLRLPVKSLIRFKCVCKSWLTLISDPHFAKSHF-DLST------RTHTNRIVFMS 65

Query: 97  YPHKSLNSLDLETSHSRVIDDDPLETGFN 11
            P   + S+D E S    ++DD   T  N
Sbjct: 66  TPALEIRSIDFEAS----LNDDSASTSLN 90


>ref|XP_002891598.1| hypothetical protein ARALYDRAFT_474209 [Arabidopsis lyrata subsp.
           lyrata] gi|297337440|gb|EFH67857.1| hypothetical protein
           ARALYDRAFT_474209 [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = -1

Query: 277 IIESILTRLPVKSVLRFRCVSKPWRSLLDDPVFVDRHFTNLST-*KLYFSNNNNNKKAVF 101
           +I  IL RLPVKSVLRFRCVSK W S+  DP F + +    ST   L     +  K  V+
Sbjct: 35  LILEILLRLPVKSVLRFRCVSKLWLSITTDPYFTNAYGARSSTRPSLLMFFKSRGKLFVY 94

Query: 100 LYPHKSLNSLDLETSHSRVID 38
            +PH + NS +   S+S+ +D
Sbjct: 95  TFPHHNQNSNE-PHSYSQHVD 114


>ref|XP_002268486.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Vitis
           vinifera]
          Length = 360

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
 Frame = -1

Query: 277 IIESILTRLPVKSVLRFRCVSKPWRSLLDDPVFVDRHFTNLST*KLYFSNNNNNKKAVFL 98
           IIE+IL RLPVKS+LRFRCV K WR+L+ D  F + H+    T            + +  
Sbjct: 8   IIENILLRLPVKSLLRFRCVCKAWRALISDSEFAEMHYQQPQT--------QARSRVLIS 59

Query: 97  YPHKSLNSLDLETS---HSRVID-DDPLE 23
            P + + S+D + S   +S V++ D PLE
Sbjct: 60  CPGRVIRSMDPDASGNDNSGVVNIDYPLE 88


>ref|NP_175213.1| putative F-box protein [Arabidopsis thaliana]
           gi|75263267|sp|Q9FZF8.1|FB44_ARATH RecName:
           Full=Putative F-box protein At1g47790
           gi|9802587|gb|AAF99789.1|AC012463_6 T2E6.11 [Arabidopsis
           thaliana] gi|332194093|gb|AEE32214.1| putative F-box
           protein [Arabidopsis thaliana]
          Length = 389

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = -1

Query: 310 EEKDESGKQWSIIESILTRLPVKSVLRFRCVSKPWRSLLDDPVFVDRHFTNLST*K-LYF 134
           + K  S     +   IL RLPVKSV+RFRCVSK W S++ DP F+  + T  ST + L F
Sbjct: 18  QSKPTSSFPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSLLF 77

Query: 133 SNNNNNKKAVFLYPHKSLNS 74
               ++K  VF  P    +S
Sbjct: 78  CFKQSDKLFVFSIPKHHYDS 97