BLASTX nr result

ID: Coptis25_contig00038681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038681
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53137.1| JHL05D22.8 [Jatropha curcas]                           77   1e-12
ref|XP_002320745.1| glycosyltransferase [Populus trichocarpa] gi...    67   1e-09
ref|XP_002272447.2| PREDICTED: alpha-1,4-galacturonosyltransfera...    64   1e-08
emb|CBI38820.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_004172284.1| PREDICTED: LOW QUALITY PROTEIN: polygalactur...    58   9e-07

>dbj|BAJ53137.1| JHL05D22.8 [Jatropha curcas]
          Length = 693

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 16/88 (18%)
 Frame = -1

Query: 217 MASKRG---LGSQRNRGG-GVCGFPVPVIALLFFSVLAPLIFLTGRGLH----------S 80
           MA KRG   +G  RNRGG G  G  +P+  ++FFS+LAPLIF  GRGLH          S
Sbjct: 1   MALKRGFSGVGIHRNRGGAGGGGSRLPIALVIFFSILAPLIFFVGRGLHTNASIVIITAS 60

Query: 79  IDQKDLPTG--KQIVDWRERLAMQHLKS 2
            DQ  +P G  KQ +DWRERLA+QH+KS
Sbjct: 61  ADQNSIPVGSNKQDLDWRERLALQHVKS 88


>ref|XP_002320745.1| glycosyltransferase [Populus trichocarpa]
           gi|222861518|gb|EEE99060.1| glycosyltransferase [Populus
           trichocarpa]
          Length = 687

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 10/81 (12%)
 Frame = -1

Query: 217 MASKRGLGSQ---RNRGGGVCGFPVPVIALLFFSVLAPLIFLTGRGL---HSIDQKD--- 65
           MA KRGL S    +NR GG  G  +P+I ++FF  L+PLIF  GR L    S DQ +   
Sbjct: 1   MALKRGLSSSGVNKNRSGGGGGSRLPIILVIFFCFLSPLIFFVGRRLIITSSSDQNNNNN 60

Query: 64  -LPTGKQIVDWRERLAMQHLK 5
            + +GKQ +DWRERLA+QH+K
Sbjct: 61  AVGSGKQQLDWRERLALQHVK 81


>ref|XP_002272447.2| PREDICTED: alpha-1,4-galacturonosyltransferase 1-like [Vitis
           vinifera]
          Length = 654

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
 Frame = -1

Query: 217 MASKRGLGS---QRNRGGGVCGFPVPVIALLFFSVLAPLIFLTGRGLHSIDQKDL--PTG 53
           MA +RGL     QRNR        +P+  ++  S+LAPLIF  GRG+++ID  D+   + 
Sbjct: 1   MALRRGLSGAALQRNRPSRS---RLPLAVVISLSLLAPLIFFVGRGIYTIDHTDVTSSSS 57

Query: 52  KQIVDWRERLAMQHLKS 2
           KQ VDWRERLA+QH+KS
Sbjct: 58  KQDVDWRERLALQHIKS 74


>emb|CBI38820.3| unnamed protein product [Vitis vinifera]
          Length = 681

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
 Frame = -1

Query: 217 MASKRGLGS---QRNRGGGVCGFPVPVIALLFFSVLAPLIFLTGRGLHSIDQKDL--PTG 53
           MA +RGL     QRNR        +P+  ++  S+LAPLIF  GRG+++ID  D+   + 
Sbjct: 1   MALRRGLSGAALQRNRPSRS---RLPLAVVISLSLLAPLIFFVGRGIYTIDHTDVTSSSS 57

Query: 52  KQIVDWRERLAMQHLKS 2
           KQ VDWRERLA+QH+KS
Sbjct: 58  KQDVDWRERLALQHIKS 74


>ref|XP_004172284.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonate
           4-alpha-galacturonosyltransferase-like [Cucumis sativus]
          Length = 679

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
 Frame = -1

Query: 217 MASKRGL----GSQRNRGGGVCGFPVPVIALLFFSVLAPLIFLTGRGLHSIDQKDLPTGK 50
           MASKRGL     +QR R GG  G  +P++ ++FF  L+P++F  GRG  + D + + +G 
Sbjct: 1   MASKRGLLSATAAQRARAGG--GSRIPLLLVIFFFFLSPVLFFFGRGFRAADLEIISSGS 58

Query: 49  --QIVDWRERLAMQHLKS 2
             Q V WRER+A+   KS
Sbjct: 59  GHQDVGWRERIALHQFKS 76


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