BLASTX nr result
ID: Coptis25_contig00038681
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038681 (295 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ53137.1| JHL05D22.8 [Jatropha curcas] 77 1e-12 ref|XP_002320745.1| glycosyltransferase [Populus trichocarpa] gi... 67 1e-09 ref|XP_002272447.2| PREDICTED: alpha-1,4-galacturonosyltransfera... 64 1e-08 emb|CBI38820.3| unnamed protein product [Vitis vinifera] 64 1e-08 ref|XP_004172284.1| PREDICTED: LOW QUALITY PROTEIN: polygalactur... 58 9e-07 >dbj|BAJ53137.1| JHL05D22.8 [Jatropha curcas] Length = 693 Score = 77.4 bits (189), Expect = 1e-12 Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 16/88 (18%) Frame = -1 Query: 217 MASKRG---LGSQRNRGG-GVCGFPVPVIALLFFSVLAPLIFLTGRGLH----------S 80 MA KRG +G RNRGG G G +P+ ++FFS+LAPLIF GRGLH S Sbjct: 1 MALKRGFSGVGIHRNRGGAGGGGSRLPIALVIFFSILAPLIFFVGRGLHTNASIVIITAS 60 Query: 79 IDQKDLPTG--KQIVDWRERLAMQHLKS 2 DQ +P G KQ +DWRERLA+QH+KS Sbjct: 61 ADQNSIPVGSNKQDLDWRERLALQHVKS 88 >ref|XP_002320745.1| glycosyltransferase [Populus trichocarpa] gi|222861518|gb|EEE99060.1| glycosyltransferase [Populus trichocarpa] Length = 687 Score = 67.4 bits (163), Expect = 1e-09 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 10/81 (12%) Frame = -1 Query: 217 MASKRGLGSQ---RNRGGGVCGFPVPVIALLFFSVLAPLIFLTGRGL---HSIDQKD--- 65 MA KRGL S +NR GG G +P+I ++FF L+PLIF GR L S DQ + Sbjct: 1 MALKRGLSSSGVNKNRSGGGGGSRLPIILVIFFCFLSPLIFFVGRRLIITSSSDQNNNNN 60 Query: 64 -LPTGKQIVDWRERLAMQHLK 5 + +GKQ +DWRERLA+QH+K Sbjct: 61 AVGSGKQQLDWRERLALQHVK 81 >ref|XP_002272447.2| PREDICTED: alpha-1,4-galacturonosyltransferase 1-like [Vitis vinifera] Length = 654 Score = 63.9 bits (154), Expect = 1e-08 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 5/77 (6%) Frame = -1 Query: 217 MASKRGLGS---QRNRGGGVCGFPVPVIALLFFSVLAPLIFLTGRGLHSIDQKDL--PTG 53 MA +RGL QRNR +P+ ++ S+LAPLIF GRG+++ID D+ + Sbjct: 1 MALRRGLSGAALQRNRPSRS---RLPLAVVISLSLLAPLIFFVGRGIYTIDHTDVTSSSS 57 Query: 52 KQIVDWRERLAMQHLKS 2 KQ VDWRERLA+QH+KS Sbjct: 58 KQDVDWRERLALQHIKS 74 >emb|CBI38820.3| unnamed protein product [Vitis vinifera] Length = 681 Score = 63.9 bits (154), Expect = 1e-08 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 5/77 (6%) Frame = -1 Query: 217 MASKRGLGS---QRNRGGGVCGFPVPVIALLFFSVLAPLIFLTGRGLHSIDQKDL--PTG 53 MA +RGL QRNR +P+ ++ S+LAPLIF GRG+++ID D+ + Sbjct: 1 MALRRGLSGAALQRNRPSRS---RLPLAVVISLSLLAPLIFFVGRGIYTIDHTDVTSSSS 57 Query: 52 KQIVDWRERLAMQHLKS 2 KQ VDWRERLA+QH+KS Sbjct: 58 KQDVDWRERLALQHIKS 74 >ref|XP_004172284.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonate 4-alpha-galacturonosyltransferase-like [Cucumis sativus] Length = 679 Score = 57.8 bits (138), Expect = 9e-07 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 6/78 (7%) Frame = -1 Query: 217 MASKRGL----GSQRNRGGGVCGFPVPVIALLFFSVLAPLIFLTGRGLHSIDQKDLPTGK 50 MASKRGL +QR R GG G +P++ ++FF L+P++F GRG + D + + +G Sbjct: 1 MASKRGLLSATAAQRARAGG--GSRIPLLLVIFFFFLSPVLFFFGRGFRAADLEIISSGS 58 Query: 49 --QIVDWRERLAMQHLKS 2 Q V WRER+A+ KS Sbjct: 59 GHQDVGWRERIALHQFKS 76