BLASTX nr result

ID: Coptis25_contig00038671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038671
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533043.1| Protein transport protein Sec24A, putative [...   168   5e-40
ref|XP_004163368.1| PREDICTED: protein transport protein Sec24-l...   167   1e-39
ref|XP_004135758.1| PREDICTED: protein transport protein Sec24-l...   167   1e-39
ref|XP_002311138.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
dbj|BAJ93266.1| predicted protein [Hordeum vulgare subsp. vulgare]    162   3e-38

>ref|XP_002533043.1| Protein transport protein Sec24A, putative [Ricinus communis]
           gi|223527181|gb|EEF29351.1| Protein transport protein
           Sec24A, putative [Ricinus communis]
          Length = 1031

 Score =  168 bits (425), Expect = 5e-40
 Identities = 80/103 (77%), Positives = 88/103 (85%)
 Frame = +3

Query: 3   VVNFGSMGIIRCKGCRTYVNPYVTFVDAGRKWRCN*FELPCSVPGEYFSHLDANGRRIDW 182
           V+NF S GIIRC+ CRTYVNPYVTF DAGRKWRCN   L   VPGEYF+HLDA GRR+D 
Sbjct: 352 VLNFVSTGIIRCRRCRTYVNPYVTFTDAGRKWRCNICALLNDVPGEYFAHLDATGRRVDL 411

Query: 183 NQRPELSKGSVDFVAPAEYMVRQQMPPLYFFLIDVSITAVRSG 311
           +QRPEL+KGSV+FVAP EYMVR  MPPLYFFLIDVSI+AVRSG
Sbjct: 412 DQRPELTKGSVEFVAPTEYMVRPPMPPLYFFLIDVSISAVRSG 454


>ref|XP_004163368.1| PREDICTED: protein transport protein Sec24-like At3g07100-like
           [Cucumis sativus]
          Length = 1031

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/103 (74%), Positives = 86/103 (83%)
 Frame = +3

Query: 3   VVNFGSMGIIRCKGCRTYVNPYVTFVDAGRKWRCN*FELPCSVPGEYFSHLDANGRRIDW 182
           V+NF S G+IRC+ CRTY+NPY TF DAGRKWRCN   L   VPG+YF+HLDA G+RID 
Sbjct: 351 VINFASTGVIRCRRCRTYINPYATFTDAGRKWRCNICSLLNDVPGDYFAHLDATGQRIDL 410

Query: 183 NQRPELSKGSVDFVAPAEYMVRQQMPPLYFFLIDVSITAVRSG 311
           +QRPEL+KGSVDFVAP EYMVR  MPPLYFFLIDVSI AVRSG
Sbjct: 411 DQRPELTKGSVDFVAPTEYMVRPPMPPLYFFLIDVSIAAVRSG 453


>ref|XP_004135758.1| PREDICTED: protein transport protein Sec24-like At3g07100-like
           [Cucumis sativus]
          Length = 1031

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/103 (74%), Positives = 86/103 (83%)
 Frame = +3

Query: 3   VVNFGSMGIIRCKGCRTYVNPYVTFVDAGRKWRCN*FELPCSVPGEYFSHLDANGRRIDW 182
           V+NF S G+IRC+ CRTY+NPY TF DAGRKWRCN   L   VPG+YF+HLDA G+RID 
Sbjct: 351 VINFASTGVIRCRRCRTYINPYATFTDAGRKWRCNICSLLNDVPGDYFAHLDATGQRIDL 410

Query: 183 NQRPELSKGSVDFVAPAEYMVRQQMPPLYFFLIDVSITAVRSG 311
           +QRPEL+KGSVDFVAP EYMVR  MPPLYFFLIDVSI AVRSG
Sbjct: 411 DQRPELTKGSVDFVAPTEYMVRPPMPPLYFFLIDVSIAAVRSG 453


>ref|XP_002311138.1| predicted protein [Populus trichocarpa] gi|222850958|gb|EEE88505.1|
           predicted protein [Populus trichocarpa]
          Length = 1043

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/103 (76%), Positives = 86/103 (83%)
 Frame = +3

Query: 3   VVNFGSMGIIRCKGCRTYVNPYVTFVDAGRKWRCN*FELPCSVPGEYFSHLDANGRRIDW 182
           V+NF S GIIRC+ CRTYVNPYVTF D+GRKWRCN   L   VPG+YF+ LDA GRRID 
Sbjct: 364 VINFVSTGIIRCRRCRTYVNPYVTFTDSGRKWRCNICALLNDVPGDYFAQLDATGRRIDL 423

Query: 183 NQRPELSKGSVDFVAPAEYMVRQQMPPLYFFLIDVSITAVRSG 311
           NQRPEL KGSVDFVAP EYMVR  MPPLYFFLIDVS++AVRSG
Sbjct: 424 NQRPELIKGSVDFVAPTEYMVRPPMPPLYFFLIDVSVSAVRSG 466


>dbj|BAJ93266.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 493

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/103 (73%), Positives = 85/103 (82%)
 Frame = +3

Query: 3   VVNFGSMGIIRCKGCRTYVNPYVTFVDAGRKWRCN*FELPCSVPGEYFSHLDANGRRIDW 182
           VVNFGS G+IRC+ CRTY+NPY TF DAGRKWRCN   L   VPGEYF  LDA+GRR D 
Sbjct: 346 VVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDASGRRFDT 405

Query: 183 NQRPELSKGSVDFVAPAEYMVRQQMPPLYFFLIDVSITAVRSG 311
           +QRPELSKG+V+FVAP EYMVR  MPP YFFLIDVS++AVRSG
Sbjct: 406 DQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSG 448


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