BLASTX nr result

ID: Coptis25_contig00038668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038668
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ00903.1| putative protein binding, partial [Elaeis guineen...    89   6e-22
ref|XP_002524218.1| Speckle-type POZ protein, putative [Ricinus ...    86   2e-21
ref|NP_030522.1| BTB/POZ and MATH domain-containing protein [Ara...    82   5e-20
gb|AAM66127.1| unknown [Arabidopsis thaliana]                          82   5e-20
ref|NP_001031516.1| BTB/POZ and MATH domain-containing protein [...    82   5e-20

>gb|AEZ00903.1| putative protein binding, partial [Elaeis guineensis]
          Length = 311

 Score = 88.6 bits (218), Expect(2) = 6e-22
 Identities = 45/69 (65%), Positives = 52/69 (75%)
 Frame = -2

Query: 261 QIF*RMIASDITFEVGEETFRAHKLILAAGSPVFRDQFFGLIRNTNIDKVVVEDVEPAIF 82
           ++F   I SDI FEVG+ETF+AHK ILAA SPVF  QFFGLI N N+DK+VVEDVEP IF
Sbjct: 126 ELFTSGIGSDIDFEVGDETFKAHKQILAARSPVFSAQFFGLIGNPNVDKIVVEDVEPPIF 185

Query: 81  KVFYLNLIS 55
           K   L + S
Sbjct: 186 KAMLLFIYS 194



 Score = 40.4 bits (93), Expect(2) = 6e-22
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = -1

Query: 301 GYKHFFKRTTLEASDFLKDDCV 236
           GYK F++RT+LE SD+LKDDC+
Sbjct: 71  GYKRFYRRTSLETSDYLKDDCL 92


>ref|XP_002524218.1| Speckle-type POZ protein, putative [Ricinus communis]
           gi|223536495|gb|EEF38142.1| Speckle-type POZ protein,
           putative [Ricinus communis]
          Length = 408

 Score = 85.5 bits (210), Expect(2) = 2e-21
 Identities = 39/59 (66%), Positives = 49/59 (83%)
 Frame = -2

Query: 243 IASDITFEVGEETFRAHKLILAAGSPVFRDQFFGLIRNTNIDKVVVEDVEPAIFKVFYL 67
           +  DI F+VG+ETF+AHKLILAA SPVFR QFFGL+ + N+DKVVVED++P+IFK   L
Sbjct: 190 VGCDIVFQVGDETFKAHKLILAARSPVFRAQFFGLVGDPNLDKVVVEDIDPSIFKAMLL 248



 Score = 41.6 bits (96), Expect(2) = 2e-21
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = -1

Query: 301 GYKHFFKRTTLEASDFLKDDCV 236
           GYK FF+RTTLE SD++KDDC+
Sbjct: 129 GYKRFFRRTTLENSDYIKDDCL 150


>ref|NP_030522.1| BTB/POZ and MATH domain-containing protein [Arabidopsis thaliana]
           gi|75277254|sp|O22286.1|BPM3_ARATH RecName: Full=BTB/POZ
           and MATH domain-containing protein 3; AltName:
           Full=Protein BTB-POZ AND MATH DOMAIN 3; Short=AtBPM3
           gi|2642158|gb|AAB87125.1| expressed protein [Arabidopsis
           thaliana] gi|22135872|gb|AAM91518.1| unknown protein
           [Arabidopsis thaliana] gi|23197672|gb|AAN15363.1|
           unknown protein [Arabidopsis thaliana]
           gi|330254625|gb|AEC09719.1| BTB/POZ and MATH
           domain-containing protein [Arabidopsis thaliana]
          Length = 408

 Score = 81.6 bits (200), Expect(2) = 5e-20
 Identities = 35/55 (63%), Positives = 47/55 (85%)
 Frame = -2

Query: 243 IASDITFEVGEETFRAHKLILAAGSPVFRDQFFGLIRNTNIDKVVVEDVEPAIFK 79
           +  DI F+VG+ET++AHKLILAA SPVFR QFFG I N N+D++V++D+EP+IFK
Sbjct: 192 VGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVIDDIEPSIFK 246



 Score = 40.8 bits (94), Expect(2) = 5e-20
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -1

Query: 301 GYKHFFKRTTLEASDFLKDDCV 236
           GYK FFKR+ LE SD+LKDDC+
Sbjct: 131 GYKRFFKRSALETSDYLKDDCL 152


>gb|AAM66127.1| unknown [Arabidopsis thaliana]
          Length = 408

 Score = 81.6 bits (200), Expect(2) = 5e-20
 Identities = 35/55 (63%), Positives = 47/55 (85%)
 Frame = -2

Query: 243 IASDITFEVGEETFRAHKLILAAGSPVFRDQFFGLIRNTNIDKVVVEDVEPAIFK 79
           +  DI F+VG+ET++AHKLILAA SPVFR QFFG I N N+D++V++D+EP+IFK
Sbjct: 192 VGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVIDDIEPSIFK 246



 Score = 40.8 bits (94), Expect(2) = 5e-20
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -1

Query: 301 GYKHFFKRTTLEASDFLKDDCV 236
           GYK FFKR+ LE SD+LKDDC+
Sbjct: 131 GYKRFFKRSALETSDYLKDDCL 152


>ref|NP_001031516.1| BTB/POZ and MATH domain-containing protein [Arabidopsis thaliana]
           gi|222422863|dbj|BAH19418.1| AT2G39760 [Arabidopsis
           thaliana] gi|330254626|gb|AEC09720.1| BTB/POZ and MATH
           domain-containing protein [Arabidopsis thaliana]
          Length = 343

 Score = 81.6 bits (200), Expect(2) = 5e-20
 Identities = 35/55 (63%), Positives = 47/55 (85%)
 Frame = -2

Query: 243 IASDITFEVGEETFRAHKLILAAGSPVFRDQFFGLIRNTNIDKVVVEDVEPAIFK 79
           +  DI F+VG+ET++AHKLILAA SPVFR QFFG I N N+D++V++D+EP+IFK
Sbjct: 192 VGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVIDDIEPSIFK 246



 Score = 40.8 bits (94), Expect(2) = 5e-20
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -1

Query: 301 GYKHFFKRTTLEASDFLKDDCV 236
           GYK FFKR+ LE SD+LKDDC+
Sbjct: 131 GYKRFFKRSALETSDYLKDDCL 152


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