BLASTX nr result

ID: Coptis25_contig00038661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038661
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512796.1| conserved hypothetical protein [Ricinus comm...   115   5e-24
ref|XP_002320398.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002304626.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_002276426.1| PREDICTED: uncharacterized protein LOC100253...   108   3e-22
ref|XP_002512697.1| hypothetical protein RCOM_1438750 [Ricinus c...   107   8e-22

>ref|XP_002512796.1| conserved hypothetical protein [Ricinus communis]
           gi|223547807|gb|EEF49299.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 211

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/81 (71%), Positives = 69/81 (85%)
 Frame = -2

Query: 340 EDEYPDLTHTLFECDGEDYEEQTMGSVIDLVKNSKDVGEEFSLEDEIDQVADLFITRFHR 161
           E+++PDLTH+LF+ +  D+E+   GSVI+LVKNSK  GEEFSLEDEID VADLFI RFHR
Sbjct: 132 EEKFPDLTHSLFDSEDLDFEDPG-GSVIELVKNSKKEGEEFSLEDEIDHVADLFIKRFHR 190

Query: 160 QLRLQKQHSIKRYQEMLHRSA 98
           Q+R+QKQ SIKRYQEML RSA
Sbjct: 191 QMRMQKQLSIKRYQEMLERSA 211


>ref|XP_002320398.1| predicted protein [Populus trichocarpa] gi|222861171|gb|EEE98713.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/77 (70%), Positives = 66/77 (85%)
 Frame = -2

Query: 340 EDEYPDLTHTLFECDGEDYEEQTMGSVIDLVKNSKDVGEEFSLEDEIDQVADLFITRFHR 161
           E++YPDLTH+LF+ +G ++E+  + SVID+VKNSK  GE FSLEDEIDQVADLFI RFH 
Sbjct: 129 EEKYPDLTHSLFDSEGVEFEDSGV-SVIDMVKNSKQEGETFSLEDEIDQVADLFIKRFHH 187

Query: 160 QLRLQKQHSIKRYQEML 110
           Q+RLQKQ S+KRYQEML
Sbjct: 188 QMRLQKQLSMKRYQEML 204


>ref|XP_002304626.1| predicted protein [Populus trichocarpa] gi|222842058|gb|EEE79605.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  109 bits (273), Expect = 2e-22
 Identities = 56/82 (68%), Positives = 65/82 (79%)
 Frame = -2

Query: 349 YSYEDEYPDLTHTLFECDGEDYEEQTMGSVIDLVKNSKDVGEEFSLEDEIDQVADLFITR 170
           Y Y+D+YPDLTH+LF+   ED  E   GS+IDLVKNSK+ GE+FSLEDEID VADLFI R
Sbjct: 112 YCYDDKYPDLTHSLFD---EDDFEDPGGSIIDLVKNSKEDGEDFSLEDEIDHVADLFIMR 168

Query: 169 FHRQLRLQKQHSIKRYQEMLHR 104
           FH+Q+RLQK  S KR QEML R
Sbjct: 169 FHKQMRLQKLESFKRNQEMLMR 190


>ref|XP_002276426.1| PREDICTED: uncharacterized protein LOC100253147 [Vitis vinifera]
           gi|147801393|emb|CAN74736.1| hypothetical protein
           VITISV_044236 [Vitis vinifera]
           gi|296082236|emb|CBI21241.3| unnamed protein product
           [Vitis vinifera]
          Length = 187

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/88 (64%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
 Frame = -2

Query: 349 YSYEDE-----YPDLTHTLFECDGEDYEEQTMGSVIDLVKNSKDVGEEFSLEDEIDQVAD 185
           Y Y++E     YPDLTH+LF+  GE  E++  GSVI++VKNSK+ GE F LEDEIDQVAD
Sbjct: 102 YGYDEEEGDEKYPDLTHSLFD-SGE--EQEVGGSVIEMVKNSKEQGENFVLEDEIDQVAD 158

Query: 184 LFITRFHRQLRLQKQHSIKRYQEMLHRS 101
           LFI RFH+Q+R+QKQ S KRYQEML RS
Sbjct: 159 LFIKRFHKQMRIQKQQSFKRYQEMLERS 186


>ref|XP_002512697.1| hypothetical protein RCOM_1438750 [Ricinus communis]
           gi|223548658|gb|EEF50149.1| hypothetical protein
           RCOM_1438750 [Ricinus communis]
          Length = 170

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/80 (70%), Positives = 63/80 (78%)
 Frame = -2

Query: 340 EDEYPDLTHTLFECDGEDYEEQTMGSVIDLVKNSKDVGEEFSLEDEIDQVADLFITRFHR 161
           +D+YPDL HTLF  D E+      GSVIDLVKNSKD GE+FSLEDEID VADLFI RFH+
Sbjct: 92  DDKYPDLRHTLF--DEEEEFNDPGGSVIDLVKNSKDEGEDFSLEDEIDHVADLFIMRFHK 149

Query: 160 QLRLQKQHSIKRYQEMLHRS 101
           Q+RLQK  S KR+QEML RS
Sbjct: 150 QMRLQKLESFKRFQEMLARS 169


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