BLASTX nr result

ID: Coptis25_contig00038651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038651
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319556.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
emb|CBI36907.3| unnamed protein product [Vitis vinifera]               56   4e-06
ref|XP_002269324.1| PREDICTED: uncharacterized protein LOC100265...    56   4e-06
emb|CAN71765.1| hypothetical protein VITISV_026917 [Vitis vinifera]    56   4e-06
ref|XP_003553663.1| PREDICTED: uncharacterized protein LOC100816...    55   5e-06

>ref|XP_002319556.1| predicted protein [Populus trichocarpa] gi|222857932|gb|EEE95479.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = -1

Query: 176 RRIYRAVKSLIEQNGFTWDETQHMVTVDDCVWSNYTKVF 60
           R  Y  +K L+EQ+GF+WDET+ MVT +DCVW +YTKV+
Sbjct: 56  RTRYNDIKFLLEQSGFSWDETRDMVTAEDCVWDSYTKVY 94


>emb|CBI36907.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -1

Query: 176 RRIYRAVKSLIEQNGFTWDETQHMVTVDDCVWSNYTK 66
           RR Y  ++SL++ NGF WD+T+ MVT DDCVW +Y K
Sbjct: 214 RRQYNVIRSLLDLNGFIWDDTRQMVTADDCVWQDYIK 250


>ref|XP_002269324.1| PREDICTED: uncharacterized protein LOC100265757 [Vitis vinifera]
          Length = 533

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -1

Query: 176 RRIYRAVKSLIEQNGFTWDETQHMVTVDDCVWSNYTK 66
           RR Y  ++SL++ NGF WD+T+ MVT DDCVW +Y K
Sbjct: 308 RRQYNVIRSLLDLNGFIWDDTRQMVTADDCVWQDYIK 344


>emb|CAN71765.1| hypothetical protein VITISV_026917 [Vitis vinifera]
          Length = 975

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -1

Query: 176 RRIYRAVKSLIEQNGFTWDETQHMVTVDDCVWSNYTK 66
           RR Y  ++SL++ NGF WD+T+ MVT DDCVW +Y K
Sbjct: 750 RRQYNVIRSLLDLNGFIWDDTRQMVTADDCVWQDYIK 786


>ref|XP_003553663.1| PREDICTED: uncharacterized protein LOC100816251 [Glycine max]
          Length = 456

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = -1

Query: 176 RRIYRAVKSLIEQNGFTWDETQHMVTVDDCVWSNYTKV 63
           RR Y  +KSL++ +GF WDET+ MV  DDCVW +Y KV
Sbjct: 259 RRQYNLIKSLLQLDGFAWDETRQMVIADDCVWQDYIKV 296


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