BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038643
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi...    54   1e-08
emb|CBI24516.3| unnamed protein product [Vitis vinifera]               54   1e-08

>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Vitis vinifera]
          Length = 1101

 Score = 54.3 bits (129), Expect(2) = 1e-08
 Identities = 27/73 (36%), Positives = 40/73 (54%)
 Frame = -3

Query: 310 KMSSSNVAPDHVLYLYLENNYPKGQEFNVLLLVSKVLTKHGLNVDLSWLCSSSTFHTEKT 131
           KM    V PDHVL+  L    PKG E ++ L + + + K+G N+DL  L +S+T    + 
Sbjct: 399 KMLDIGVVPDHVLFFTLMQKQPKGHELHLALKILQAIAKNGCNLDLCLLSTSATHSPTQD 458

Query: 130 FENDIELLFSRIL 92
            E +IE L   I+
Sbjct: 459 VEQEIECLLGEIV 471



 Score = 29.6 bits (65), Expect(2) = 1e-08
 Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 108 CLAESWVALKF-LPNEVFSVFISALSAAGKTNHAL 7
           CL    V   F L +  F +FISAL AAGKT+ AL
Sbjct: 465 CLLGEIVRRNFALADVAFGIFISALCAAGKTDAAL 499


>emb|CBI24516.3| unnamed protein product [Vitis vinifera]
          Length = 970

 Score = 54.3 bits (129), Expect(2) = 1e-08
 Identities = 27/73 (36%), Positives = 40/73 (54%)
 Frame = -3

Query: 310 KMSSSNVAPDHVLYLYLENNYPKGQEFNVLLLVSKVLTKHGLNVDLSWLCSSSTFHTEKT 131
           KM    V PDHVL+  L    PKG E ++ L + + + K+G N+DL  L +S+T    + 
Sbjct: 279 KMLDIGVVPDHVLFFTLMQKQPKGHELHLALKILQAIAKNGCNLDLCLLSTSATHSPTQD 338

Query: 130 FENDIELLFSRIL 92
            E +IE L   I+
Sbjct: 339 VEQEIECLLGEIV 351



 Score = 29.6 bits (65), Expect(2) = 1e-08
 Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 108 CLAESWVALKF-LPNEVFSVFISALSAAGKTNHAL 7
           CL    V   F L +  F +FISAL AAGKT+ AL
Sbjct: 345 CLLGEIVRRNFALADVAFGIFISALCAAGKTDAAL 379