BLASTX nr result

ID: Coptis25_contig00038633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038633
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516988.1| Major pollen allergen Car b 1 isoform, putat...    72   4e-11
emb|CBL94173.1| putative Mal d 1.03G isoallergen [Malus x domest...    70   1e-10
gb|AAX18316.1| major allergen Mal d 1.03C [Malus x domestica]          70   1e-10
gb|AAX18324.1| major allergen Mal d 1.03G [Malus x domestica] gi...    70   1e-10
gb|AAS00051.1| Mal d 1-like [Malus x domestica]                        70   2e-10

>ref|XP_002516988.1| Major pollen allergen Car b 1 isoform, putative [Ricinus communis]
           gi|223544076|gb|EEF45602.1| Major pollen allergen Car b
           1 isoform, putative [Ricinus communis]
          Length = 125

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
 Frame = +1

Query: 223 SFSDEFTSPIPPKRFWAAAIVDSHNIIPKIAPQYIESIE-LEGDGGVGTIKTFKFGPGVK 399
           ++SDE+TSP+PP R + A I+DS+N+IPK+ PQ ++SIE ++GDGGVG+IK   F  G+ 
Sbjct: 5   TYSDEYTSPVPPARLFKALILDSNNLIPKLMPQIVKSIEFVQGDGGVGSIKQINFQEGMS 64

Query: 400 DMIV 411
            + V
Sbjct: 65  PIEV 68


>emb|CBL94173.1| putative Mal d 1.03G isoallergen [Malus x domestica]
          Length = 159

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = +1

Query: 223 SFSDEFTSPIPPKRFWAAAIVDSHNIIPKIAPQYIESIE-LEGDGGVGTIKTFKFGPG 393
           ++  EFTS IPP R + A ++D+ N+IPKIAPQ ++S E LEGDGGVGTIK   FG G
Sbjct: 5   TYESEFTSVIPPARLYNAFVLDADNLIPKIAPQAVKSTEILEGDGGVGTIKKINFGEG 62


>gb|AAX18316.1| major allergen Mal d 1.03C [Malus x domestica]
          Length = 159

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = +1

Query: 223 SFSDEFTSPIPPKRFWAAAIVDSHNIIPKIAPQYIESIE-LEGDGGVGTIKTFKFGPG 393
           ++  EFTS IPP R + A ++D+ N+IPKIAPQ ++S E LEGDGGVGTIK   FG G
Sbjct: 5   TYESEFTSVIPPARLYNAFVLDADNLIPKIAPQAVKSTEILEGDGGVGTIKKINFGEG 62


>gb|AAX18324.1| major allergen Mal d 1.03G [Malus x domestica]
           gi|60460787|gb|AAX21008.1| Mal d 1.03G01 [Malus x
           domestica]
          Length = 159

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = +1

Query: 223 SFSDEFTSPIPPKRFWAAAIVDSHNIIPKIAPQYIESIE-LEGDGGVGTIKTFKFGPG 393
           ++  EFTS IPP R + A ++D+ N+IPKIAPQ ++S E LEGDGGVGTIK   FG G
Sbjct: 5   TYESEFTSVIPPARLYNAFVLDADNLIPKIAPQAVKSTEILEGDGGVGTIKKINFGEG 62


>gb|AAS00051.1| Mal d 1-like [Malus x domestica]
          Length = 159

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = +1

Query: 223 SFSDEFTSPIPPKRFWAAAIVDSHNIIPKIAPQYIESIE-LEGDGGVGTIKTFKFGPG 393
           ++  EFTS IPP R + A ++D+ N+IPKIAPQ ++S E LEGDGGVGTIK   FG G
Sbjct: 5   TYESEFTSVIPPGRLYNAFVLDADNLIPKIAPQAVKSTEILEGDGGVGTIKKINFGEG 62


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