BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038631
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   152   2e-35
ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
ref|XP_002315895.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002531063.1| pentatricopeptide repeat-containing protein,...   147   7e-34

>ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71060, mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/103 (69%), Positives = 89/103 (86%)
 Frame = -3

Query: 315 VSLPLVVEVLKKLSNAGALALTFFRWVEKKEGYKHTNESYNALIEALGKIKQFNSIWDIV 136
           +S  L+VEVLKKLSNAG LAL+FFRW EK++G+KHT ESYN LIEALGKIKQFN IW++V
Sbjct: 120 LSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLV 179

Query: 135 EEMKGKGLVTKETFGLIMRRYARCRKTKEAIETFKKMEKFGMK 7
            +MK KG++++ETF LI RRYAR RK KEA+E+F+KMEKFG +
Sbjct: 180 SDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQ 222


>ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/103 (69%), Positives = 89/103 (86%)
 Frame = -3

Query: 315 VSLPLVVEVLKKLSNAGALALTFFRWVEKKEGYKHTNESYNALIEALGKIKQFNSIWDIV 136
           +S  L+VEVLKKLSNAG LAL+FFRW EK++G+KHT ESYN LIEALGKIKQFN IW++V
Sbjct: 120 LSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLV 179

Query: 135 EEMKGKGLVTKETFGLIMRRYARCRKTKEAIETFKKMEKFGMK 7
            +MK KG++++ETF LI RRYAR RK KEA+E+F+KMEKFG +
Sbjct: 180 SDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQ 222


>ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial [Vitis vinifera]
          Length = 531

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/104 (67%), Positives = 91/104 (87%)
 Frame = -3

Query: 318 NVSLPLVVEVLKKLSNAGALALTFFRWVEKKEGYKHTNESYNALIEALGKIKQFNSIWDI 139
           +VS  LV+EVLKKLSN+G +AL+FFRW EK++G+K++ E+YNALIEALGKIKQF  IW++
Sbjct: 108 DVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKMIWNL 167

Query: 138 VEEMKGKGLVTKETFGLIMRRYARCRKTKEAIETFKKMEKFGMK 7
           V +M+ KGL+T+ETF LI RRYAR RK KEA+ETF+KMEKFG++
Sbjct: 168 VNDMRSKGLLTQETFALISRRYARARKVKEAVETFEKMEKFGLQ 211


>ref|XP_002315895.1| predicted protein [Populus trichocarpa] gi|222864935|gb|EEF02066.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/105 (68%), Positives = 88/105 (83%)
 Frame = -3

Query: 315 VSLPLVVEVLKKLSNAGALALTFFRWVEKKEGYKHTNESYNALIEALGKIKQFNSIWDIV 136
           VS  LV E LKKLSNAGALAL+FFRW EK++G++++ ESY+ALIE+LGKIKQFN IW++V
Sbjct: 3   VSPSLVFEALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNLV 62

Query: 135 EEMKGKGLVTKETFGLIMRRYARCRKTKEAIETFKKMEKFGMKHE 1
            +MK KGL+ KETF LI RRYAR RK KEA++ F KMEKFG+K E
Sbjct: 63  TDMKQKGLLNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIE 107


>ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529358|gb|EEF31324.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  147 bits (372), Expect = 7e-34
 Identities = 71/105 (67%), Positives = 89/105 (84%)
 Frame = -3

Query: 315 VSLPLVVEVLKKLSNAGALALTFFRWVEKKEGYKHTNESYNALIEALGKIKQFNSIWDIV 136
           VS  LV+EVLK+LSNAGALAL+FF+W EK++G+ +  ESYNALI++LGKIKQFN IW++V
Sbjct: 111 VSPALVLEVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLV 170

Query: 135 EEMKGKGLVTKETFGLIMRRYARCRKTKEAIETFKKMEKFGMKHE 1
            +MK KG++TKETF LI RRYAR  K KEA+ TF+KMEKFG+K E
Sbjct: 171 NDMKRKGVLTKETFALISRRYARSGKVKEAMNTFEKMEKFGLKIE 215