BLASTX nr result

ID: Coptis25_contig00038610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038610
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285229.1| PREDICTED: uncharacterized membrane protein ...   226   4e-57
ref|XP_002328160.1| predicted protein [Populus trichocarpa] gi|2...   222   5e-56
ref|XP_002529937.1| UDP-glucuronic acid/UDP-N-acetylgalactosamin...   220   3e-55
ref|XP_003597262.1| Membrane protein, putative [Medicago truncat...   215   6e-54
ref|XP_003543477.1| PREDICTED: uncharacterized membrane protein ...   214   1e-53

>ref|XP_002285229.1| PREDICTED: uncharacterized membrane protein At1g06890 [Vitis
           vinifera] gi|297746270|emb|CBI16326.3| unnamed protein
           product [Vitis vinifera]
          Length = 348

 Score =  226 bits (576), Expect = 4e-57
 Identities = 116/147 (78%), Positives = 126/147 (85%)
 Frame = -1

Query: 443 MVETSRFQMGXXXXXXXXXXXXXXXXICNKALMSNLGFPFATTLTSWHLMVTFCTLHVAQ 264
           M E S FQ+G                ICNKALMSNLGFPFATTLTSWHLMVTFCTLHVAQ
Sbjct: 1   MGEMSGFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHVAQ 60

Query: 263 KFNVFETKSIEMKTIVLFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETAFL 84
           +FNVFE+KS++MKT++LFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLET FL
Sbjct: 61  RFNVFESKSVDMKTVMLFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFL 120

Query: 83  KKQFSQKIKLSLFVLLLGVGIASITDL 3
           KKQFSQKIKLSLF+LL+GV IAS+TDL
Sbjct: 121 KKQFSQKIKLSLFLLLVGVAIASVTDL 147


>ref|XP_002328160.1| predicted protein [Populus trichocarpa] gi|222837675|gb|EEE76040.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  222 bits (566), Expect = 5e-56
 Identities = 115/147 (78%), Positives = 123/147 (83%)
 Frame = -1

Query: 443 MVETSRFQMGXXXXXXXXXXXXXXXXICNKALMSNLGFPFATTLTSWHLMVTFCTLHVAQ 264
           M E   FQ+G                ICNKALMSNLGFPFATTLTSWHLMVTFCTLH AQ
Sbjct: 1   MGEMPSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60

Query: 263 KFNVFETKSIEMKTIVLFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETAFL 84
           + N+FE+KSIEMK ++LFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLET FL
Sbjct: 61  RLNLFESKSIEMKPVMLFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFL 120

Query: 83  KKQFSQKIKLSLFVLLLGVGIASITDL 3
           KKQFSQKIKLSLFVLL+GVGIAS+TDL
Sbjct: 121 KKQFSQKIKLSLFVLLVGVGIASVTDL 147


>ref|XP_002529937.1| UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative
           [Ricinus communis] gi|223530567|gb|EEF32445.1|
           UDP-glucuronic acid/UDP-N-acetylgalactosamine
           transporter, putative [Ricinus communis]
          Length = 343

 Score =  220 bits (560), Expect = 3e-55
 Identities = 112/147 (76%), Positives = 124/147 (84%)
 Frame = -1

Query: 443 MVETSRFQMGXXXXXXXXXXXXXXXXICNKALMSNLGFPFATTLTSWHLMVTFCTLHVAQ 264
           M E + FQ+G                ICNKALMSNLGFPFATTLTSWHLMVT+CTLH AQ
Sbjct: 1   MGEMTSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTYCTLHCAQ 60

Query: 263 KFNVFETKSIEMKTIVLFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETAFL 84
           +FN+FE+K I+MKT++LFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLET FL
Sbjct: 61  RFNLFESKPIDMKTVMLFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFL 120

Query: 83  KKQFSQKIKLSLFVLLLGVGIASITDL 3
           KKQFSQ IKLSLF+LL+GVGIAS+TDL
Sbjct: 121 KKQFSQNIKLSLFLLLVGVGIASVTDL 147


>ref|XP_003597262.1| Membrane protein, putative [Medicago truncatula]
           gi|355486310|gb|AES67513.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 354

 Score =  215 bits (548), Expect = 6e-54
 Identities = 109/147 (74%), Positives = 121/147 (82%)
 Frame = -1

Query: 443 MVETSRFQMGXXXXXXXXXXXXXXXXICNKALMSNLGFPFATTLTSWHLMVTFCTLHVAQ 264
           M E  +FQ+G                ICNKALMS LGFPFATTLTSWHLMVTFCTLHVAQ
Sbjct: 1   MGEMGKFQLGVIGALFLSVASSVSIVICNKALMSKLGFPFATTLTSWHLMVTFCTLHVAQ 60

Query: 263 KFNVFETKSIEMKTIVLFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETAFL 84
           + N+F TKSI+MKTI+LFG LNGVSIG LNLSLGFNS+GFYQMTKLAIIPFTV+LET FL
Sbjct: 61  RLNLFVTKSIDMKTIMLFGFLNGVSIGFLNLSLGFNSVGFYQMTKLAIIPFTVMLETIFL 120

Query: 83  KKQFSQKIKLSLFVLLLGVGIASITDL 3
           KKQFSQKIK +LF+LL+GVG+ASITDL
Sbjct: 121 KKQFSQKIKFTLFLLLVGVGVASITDL 147


>ref|XP_003543477.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Glycine
           max]
          Length = 349

 Score =  214 bits (545), Expect = 1e-53
 Identities = 108/147 (73%), Positives = 121/147 (82%)
 Frame = -1

Query: 443 MVETSRFQMGXXXXXXXXXXXXXXXXICNKALMSNLGFPFATTLTSWHLMVTFCTLHVAQ 264
           M E S FQ+G                ICNKALMSNLGFPFATTLTSWHLMVTFCTLH AQ
Sbjct: 1   MGEMSNFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60

Query: 263 KFNVFETKSIEMKTIVLFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETAFL 84
           + N+F +KS+++KT++LFGILNG+SIG LNLSLGFNSIGFYQMTKLAIIPFTVLLET FL
Sbjct: 61  RLNLFVSKSVDLKTVMLFGILNGISIGFLNLSLGFNSIGFYQMTKLAIIPFTVLLETIFL 120

Query: 83  KKQFSQKIKLSLFVLLLGVGIASITDL 3
           KKQFS KIK +LF+LL+GVGIASITDL
Sbjct: 121 KKQFSSKIKFALFLLLVGVGIASITDL 147


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