BLASTX nr result

ID: Coptis25_contig00038588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038588
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264162.1| PREDICTED: uncharacterized protein LOC100261...   114   1e-23
ref|XP_003589866.1| hypothetical protein MTR_1g040610 [Medicago ...   100   9e-20
ref|XP_003555484.1| PREDICTED: uncharacterized protein LOC100803...   100   2e-19
ref|XP_003591662.1| hypothetical protein MTR_1g090340 [Medicago ...    96   2e-18
ref|XP_003535473.1| PREDICTED: uncharacterized protein LOC100815...    95   5e-18

>ref|XP_002264162.1| PREDICTED: uncharacterized protein LOC100261025 [Vitis vinifera]
          Length = 1285

 Score =  114 bits (284), Expect = 1e-23
 Identities = 77/174 (44%), Positives = 94/174 (54%), Gaps = 23/174 (13%)
 Frame = +2

Query: 20  MATAGETSYQGGVGGKFRKNEQNRNKSSTPYDR------NRKKGLISSVLDTSSRIITSS 181
           MATAGE SY+ G GGKFRK    R ++ TPYDR      N + G +S V+D +SR+IT+S
Sbjct: 1   MATAGEGSYEVGGGGKFRKRPFRRPQT-TPYDRPPNSLRNTRNGWLSKVVDPASRLITAS 59

Query: 182 ARKFFSSVY-------------PPSPTVENHESRDAFAGSSFGDQERIGNEKI----ELS 310
           A +FF SV+             PP P V N E RD    + F +      + I       
Sbjct: 60  AHRFFDSVFRRRLPPPPLPRPLPPPPEV-NQEPRDKLQAAVFTNSAEAQEQDIFDGSNPR 118

Query: 311 NASDIGSVNDLEQIFKQKIFTRAEIDRLTELLHSRTVHVSAVEERKRLEPSTSR 472
           N+SD  S   LEQI KQK FTR EID LT LLHSRTV     +E KR E   S+
Sbjct: 119 NSSDGSSFTQLEQILKQKTFTRYEIDHLTALLHSRTVDHPVEDEEKRSEAKFSK 172


>ref|XP_003589866.1| hypothetical protein MTR_1g040610 [Medicago truncatula]
           gi|355478914|gb|AES60117.1| hypothetical protein
           MTR_1g040610 [Medicago truncatula]
          Length = 1383

 Score =  100 bits (250), Expect = 9e-20
 Identities = 71/171 (41%), Positives = 95/171 (55%), Gaps = 25/171 (14%)
 Frame = +2

Query: 20  MATAGETS-YQGGVGG--KFRKNEQNRNKSSTPYDR--------NRKKGLISSVLDTSSR 166
           MATA E + Y+ G GG  KFRK    R ++ TPYDR        N+  G +S ++D + R
Sbjct: 1   MATAREENGYENGGGGYGKFRKRPFKRTQT-TPYDRPPTALRNPNQNNGWLSKLIDPAQR 59

Query: 167 IITSSARKFFSSVY-------PPSPTVE----NHESRDAF---AGSSFGDQERIGNEKIE 304
           +IT SA K FSSV+       PPS TV+    N +    F   A  S G Q+RI  E  +
Sbjct: 60  LITYSAHKLFSSVFRKRLNPPPPSETVQEARGNRQEAAIFEQVANESSGQQQRILGESSD 119

Query: 305 LSNASDIGSVNDLEQIFKQKIFTRAEIDRLTELLHSRTVHVSAVEERKRLE 457
             N SD   + +LE++ KQK FTR+EID L EL+HSR+V  +  EE  + E
Sbjct: 120 QINLSDGVGLPELEEVLKQKTFTRSEIDHLVELMHSRSVDTAVREEGNKTE 170


>ref|XP_003555484.1| PREDICTED: uncharacterized protein LOC100803645 [Glycine max]
          Length = 1230

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 66/176 (37%), Positives = 91/176 (51%), Gaps = 22/176 (12%)
 Frame = +2

Query: 35  ETSYQGGVGGKFRKNEQNRNKSSTPYDRN---------RKKGLISSVLDTSSRIITSSAR 187
           E  Y+GG GGKFRK        +TPYDR          +  G +S ++D + R+IT SA 
Sbjct: 7   EKGYEGGAGGKFRKRPFRSRSQTTPYDRPPTSLRNPNWKNNGWLSKLVDPAQRLITYSAH 66

Query: 188 KFFSSVY-----PPSPTVE-----NHESRDA--FAGSSFGDQER-IGNEKIELSNASDIG 328
             FSS++     PPS   E     NH   DA     +S G Q+  +G    ++ N SD G
Sbjct: 67  SLFSSLFRKRLPPPSSETEREARNNHPQEDATFVTNNSSGTQQGPVGGSDAQI-NCSDGG 125

Query: 329 SVNDLEQIFKQKIFTRAEIDRLTELLHSRTVHVSAVEERKRLEPSTSRHVEAPGEQ 496
            + +LE++ KQK FTR+EID LT L+ SRTV+    EE K  E   S  +   G++
Sbjct: 126 GLTELEKLLKQKTFTRSEIDHLTALMRSRTVNAPVREEEKGTEMVPSEPMLLSGQK 181


>ref|XP_003591662.1| hypothetical protein MTR_1g090340 [Medicago truncatula]
           gi|358346069|ref|XP_003637095.1| hypothetical protein
           MTR_070s0022 [Medicago truncatula]
           gi|355480710|gb|AES61913.1| hypothetical protein
           MTR_1g090340 [Medicago truncatula]
           gi|355503030|gb|AES84233.1| hypothetical protein
           MTR_070s0022 [Medicago truncatula]
          Length = 1369

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 69/203 (33%), Positives = 96/203 (47%), Gaps = 44/203 (21%)
 Frame = +2

Query: 20  MATAGETS--YQGGVGGKFRKNEQNRNKSSTPYDR---------NRKKGLISSVLDTSSR 166
           MAT G+    Y+GG GGKFRK    R   +TPYDR         +   G IS ++D + R
Sbjct: 1   MATEGKEKNLYEGGTGGKFRKRPF-RKTQTTPYDRPPAALRNPNSNNNGWISKLVDPAHR 59

Query: 167 IITSSARKFFSSVY-------PPSPTV-------------------------ENHESRDA 250
           +IT  A   FSS+        PP+P                           ENH+    
Sbjct: 60  LITHGAHSLFSSLLRKRLPPPPPAPNSSGMEQETGQHNHQEEAVEMEQEMRQENHQEESV 119

Query: 251 FAGSSFGDQERIGNEKIELS-NASDIGSVNDLEQIFKQKIFTRAEIDRLTELLHSRTVHV 427
              SS   Q  +G   ++++ + SD G + +LE++ KQKIFTR+EID LT L+ SRTV V
Sbjct: 120 AKESSGNQQRAVGESNVQVNCSDSDQGGLTELEKLLKQKIFTRSEIDHLTALMQSRTVDV 179

Query: 428 SAVEERKRLEPSTSRHVEAPGEQ 496
           +   E KR E   S  +   G++
Sbjct: 180 AVRGEEKRSEMVPSEPILPSGQK 202


>ref|XP_003535473.1| PREDICTED: uncharacterized protein LOC100815527 [Glycine max]
          Length = 1289

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 63/165 (38%), Positives = 83/165 (50%), Gaps = 24/165 (14%)
 Frame = +2

Query: 35  ETSYQGGVGGKFRKNEQNRNKSSTPYDR----------NRKKGLISSVLDTSSRIITSSA 184
           E  Y+GG GGKFRK        +TPYDR              G +S ++D + R+IT SA
Sbjct: 7   EKGYEGGAGGKFRKRPFRSRIQTTPYDRPPTSLRNPSRKNNNGWLSKLVDPAQRLITYSA 66

Query: 185 RKFFSSVY----PPSPTVE-------NHESRDAFA---GSSFGDQERIGNEKIELSNASD 322
              FSS++    PP P+ E       NH     F     SS   Q  +G    ++ N SD
Sbjct: 67  HSLFSSLFRKRLPPPPSSETEQEARNNHLEDAVFVTNNNSSGTQQGPVGGSDAQI-NCSD 125

Query: 323 IGSVNDLEQIFKQKIFTRAEIDRLTELLHSRTVHVSAVEERKRLE 457
            G + +LE++ KQK FTR+EID LT L+ SRTV+    EE K  E
Sbjct: 126 RGGLTELEKLLKQKTFTRSEIDHLTALMRSRTVNAPVKEEVKGTE 170


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