BLASTX nr result

ID: Coptis25_contig00038573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038573
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888789.1| hypothetical protein ARALYDRAFT_894888 [Arab...   264   5e-69
ref|NP_177228.1| endoglucanase 8 [Arabidopsis thaliana] gi|75262...   263   1e-68
emb|CAA67157.1| endo-1,4-beta-glucanase [Arabidopsis thaliana]        263   1e-68
emb|CAA67156.1| endo-1,4-beta-glucanase [Arabidopsis thaliana]        261   4e-68
ref|XP_002890576.1| glycosyl hydrolase family 9 protein [Arabido...   257   8e-67

>ref|XP_002888789.1| hypothetical protein ARALYDRAFT_894888 [Arabidopsis lyrata subsp.
           lyrata] gi|297334630|gb|EFH65048.1| hypothetical protein
           ARALYDRAFT_894888 [Arabidopsis lyrata subsp. lyrata]
          Length = 492

 Score =  264 bits (675), Expect = 5e-69
 Identities = 124/144 (86%), Positives = 135/144 (93%)
 Frame = -2

Query: 434 HNYEDALQKSILFFEGQRSGKLPPNQRLKWRCDSALKDGFSTAGVDLTGGYYDAGDNVKF 255
           H+Y DAL+KSILFFEGQRSGKLPP+QRLKWR DSAL+DG S+AGVDL+GGYYDAGDN+KF
Sbjct: 27  HDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDG-SSAGVDLSGGYYDAGDNIKF 85

Query: 254 GFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAFSD 75
           GFPMAFTTTMLSWSIIDFGKTMG ELKNAV AVKW TDYLLK TA+P  V+VQVGDA+SD
Sbjct: 86  GFPMAFTTTMLSWSIIDFGKTMGPELKNAVKAVKWGTDYLLKATAIPGVVFVQVGDAYSD 145

Query: 74  HNCWERPEDMDTLRTVYKVDRAHP 3
           HNCWERPEDMDTLRTVYK+DRAHP
Sbjct: 146 HNCWERPEDMDTLRTVYKIDRAHP 169


>ref|NP_177228.1| endoglucanase 8 [Arabidopsis thaliana]
           gi|75262268|sp|Q9CAC1.1|GUN8_ARATH RecName:
           Full=Endoglucanase 8; AltName: Full=Cellulase 1;
           Short=AtCEL1; AltName: Full=Endo-1,4-beta glucanase 8;
           Flags: Precursor gi|12324747|gb|AAG52329.1|AC011663_8
           endo-1,4-beta-glucanase; 41628-45234 [Arabidopsis
           thaliana] gi|15081781|gb|AAK82545.1| At1g70710/F5A18_11
           [Arabidopsis thaliana] gi|18377811|gb|AAL67092.1|
           At1g70710/F5A18_11 [Arabidopsis thaliana]
           gi|332196982|gb|AEE35103.1| endoglucanase 8 [Arabidopsis
           thaliana]
          Length = 492

 Score =  263 bits (672), Expect = 1e-68
 Identities = 123/144 (85%), Positives = 135/144 (93%)
 Frame = -2

Query: 434 HNYEDALQKSILFFEGQRSGKLPPNQRLKWRCDSALKDGFSTAGVDLTGGYYDAGDNVKF 255
           H+Y DAL+KSILFFEGQRSGKLPP+QRLKWR DSAL+DG S+AGVDL+GGYYDAGDN+KF
Sbjct: 27  HDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDG-SSAGVDLSGGYYDAGDNIKF 85

Query: 254 GFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAFSD 75
           GFPMAFTTTMLSWSIIDFGKTMG EL+NAV AVKW TDYLLK TA+P  V+VQVGDA+SD
Sbjct: 86  GFPMAFTTTMLSWSIIDFGKTMGPELRNAVKAVKWGTDYLLKATAIPGVVFVQVGDAYSD 145

Query: 74  HNCWERPEDMDTLRTVYKVDRAHP 3
           HNCWERPEDMDTLRTVYK+DRAHP
Sbjct: 146 HNCWERPEDMDTLRTVYKIDRAHP 169


>emb|CAA67157.1| endo-1,4-beta-glucanase [Arabidopsis thaliana]
          Length = 492

 Score =  263 bits (672), Expect = 1e-68
 Identities = 123/144 (85%), Positives = 135/144 (93%)
 Frame = -2

Query: 434 HNYEDALQKSILFFEGQRSGKLPPNQRLKWRCDSALKDGFSTAGVDLTGGYYDAGDNVKF 255
           H+Y DAL+KSILFFEGQRSGKLPP+QRLKWR DSAL+DG S+AGVDL+GGYYDAGDN+KF
Sbjct: 27  HDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDG-SSAGVDLSGGYYDAGDNIKF 85

Query: 254 GFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAFSD 75
           GFPMAFTTTMLSWSIIDFGKTMG EL+NAV AVKW TDYLLK TA+P  V+VQVGDA+SD
Sbjct: 86  GFPMAFTTTMLSWSIIDFGKTMGPELRNAVKAVKWGTDYLLKATAIPGVVFVQVGDAYSD 145

Query: 74  HNCWERPEDMDTLRTVYKVDRAHP 3
           HNCWERPEDMDTLRTVYK+DRAHP
Sbjct: 146 HNCWERPEDMDTLRTVYKIDRAHP 169


>emb|CAA67156.1| endo-1,4-beta-glucanase [Arabidopsis thaliana]
          Length = 493

 Score =  261 bits (667), Expect = 4e-68
 Identities = 122/144 (84%), Positives = 135/144 (93%)
 Frame = -2

Query: 434 HNYEDALQKSILFFEGQRSGKLPPNQRLKWRCDSALKDGFSTAGVDLTGGYYDAGDNVKF 255
           H+Y DAL+KSILFFEGQRSGKLPP+QRLKWR DSAL+DG S+AGV+L+GGYYDAGDN+KF
Sbjct: 27  HDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDG-SSAGVNLSGGYYDAGDNIKF 85

Query: 254 GFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAFSD 75
           GFPMAFTTTMLSWSIIDFGKTMG EL+NAV AVKW TDYLLK TA+P  V+VQVGDA+SD
Sbjct: 86  GFPMAFTTTMLSWSIIDFGKTMGPELRNAVKAVKWGTDYLLKATAIPGVVFVQVGDAYSD 145

Query: 74  HNCWERPEDMDTLRTVYKVDRAHP 3
           HNCWERPEDMDTLRTVYK+DRAHP
Sbjct: 146 HNCWERPEDMDTLRTVYKIDRAHP 169


>ref|XP_002890576.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336418|gb|EFH66835.1| glycosyl hydrolase
           family 9 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score =  257 bits (656), Expect = 8e-67
 Identities = 118/144 (81%), Positives = 133/144 (92%)
 Frame = -2

Query: 434 HNYEDALQKSILFFEGQRSGKLPPNQRLKWRCDSALKDGFSTAGVDLTGGYYDAGDNVKF 255
           H+Y DAL+KSILFFEGQRSGKLPP+QRLKWR DSAL+DG S+AGVDLTGGYYDAGDNVKF
Sbjct: 27  HDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDG-SSAGVDLTGGYYDAGDNVKF 85

Query: 254 GFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAFSD 75
           GFPMAFTTTM+SWS+IDFGKTMG EL+NAV A+KW TDYL+K T +P  V+VQVGDA+SD
Sbjct: 86  GFPMAFTTTMMSWSVIDFGKTMGPELENAVKAIKWGTDYLMKATQIPGVVFVQVGDAYSD 145

Query: 74  HNCWERPEDMDTLRTVYKVDRAHP 3
           HNCWERPEDMDTLRTVYK+D+ HP
Sbjct: 146 HNCWERPEDMDTLRTVYKIDKDHP 169


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