BLASTX nr result

ID: Coptis25_contig00038566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038566
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm...   135   3e-30
ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_002314365.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_004161085.1| PREDICTED: condensin-2 complex subunit H2-li...   122   3e-26
ref|XP_004144909.1| PREDICTED: condensin-2 complex subunit H2-li...   120   9e-26

>ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis]
           gi|223544047|gb|EEF45573.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 667

 Score =  135 bits (341), Expect = 3e-30
 Identities = 70/111 (63%), Positives = 82/111 (73%)
 Frame = -2

Query: 334 IPDFGQDDFTMPEVENTFMDAEGPPNHENPDGDFHFSSDDVFQPEDVPSHASLEDLCRSH 155
           +PDFGQ D  +PE  N +MD +   +HE      HF  ++ F  ED  S ASLEDLCRSH
Sbjct: 408 VPDFGQPDDDIPE--NMYMDED--LHHEKVGSSTHFDINEAFGNEDPSSQASLEDLCRSH 463

Query: 154 LDSLLASIAETEKQTELATRVSTWKQRIESTLEEQDSRPPFDIHEYGTRVL 2
           LD+LLA+IAETEKQTELATRVS+WKQ+IE  LEEQDSRP FDIH YG R+L
Sbjct: 464 LDALLANIAETEKQTELATRVSSWKQKIEHNLEEQDSRPSFDIHAYGERIL 514


>ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|222838580|gb|EEE76945.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score =  127 bits (319), Expect = 9e-28
 Identities = 66/110 (60%), Positives = 78/110 (70%)
 Frame = -2

Query: 331 PDFGQDDFTMPEVENTFMDAEGPPNHENPDGDFHFSSDDVFQPEDVPSHASLEDLCRSHL 152
           PDFGQ D  +PE ++       PP  ++ DG   F +   F   D  S ASLEDLCRSHL
Sbjct: 411 PDFGQHDDEIPEYKDEDFP---PPREKHDDGATCFDTYKDFGHGDQSSQASLEDLCRSHL 467

Query: 151 DSLLASIAETEKQTELATRVSTWKQRIESTLEEQDSRPPFDIHEYGTRVL 2
           D+LLA+IAETEKQTELATRVS+WKQ+IE  LEEQDS PPFDIH YG R++
Sbjct: 468 DALLANIAETEKQTELATRVSSWKQKIEQNLEEQDSHPPFDIHAYGERIV 517


>ref|XP_002314365.1| predicted protein [Populus trichocarpa] gi|222863405|gb|EEF00536.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score =  126 bits (316), Expect = 2e-27
 Identities = 66/111 (59%), Positives = 78/111 (70%)
 Frame = -2

Query: 334 IPDFGQDDFTMPEVENTFMDAEGPPNHENPDGDFHFSSDDVFQPEDVPSHASLEDLCRSH 155
           IPDFGQ D  + E  N   D+  P + ++ DG  HF +   F   D  S ASLEDLCRSH
Sbjct: 421 IPDFGQPDEEISECMNE--DSPPPLHEKHDDGGTHFDTYKDFGHGDQRSQASLEDLCRSH 478

Query: 154 LDSLLASIAETEKQTELATRVSTWKQRIESTLEEQDSRPPFDIHEYGTRVL 2
           LD+LLA+IAETEKQTELA RVS+WK +IE  LEEQDS PPFDIH YG R++
Sbjct: 479 LDALLANIAETEKQTELAARVSSWKLKIEQNLEEQDSHPPFDIHAYGERIV 529


>ref|XP_004161085.1| PREDICTED: condensin-2 complex subunit H2-like [Cucumis sativus]
          Length = 622

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/111 (57%), Positives = 74/111 (66%)
 Frame = -2

Query: 334 IPDFGQDDFTMPEVENTFMDAEGPPNHENPDGDFHFSSDDVFQPEDVPSHASLEDLCRSH 155
           +PD  Q D   P   N FMD      +E  D   HF + + ++PE   S +SLEDLCRSH
Sbjct: 411 MPDVNQPDIGDPN--NHFMDEATCFENEKHDAAAHFDNGEAYEPEFPDSRSSLEDLCRSH 468

Query: 154 LDSLLASIAETEKQTELATRVSTWKQRIESTLEEQDSRPPFDIHEYGTRVL 2
           LD+LLASIAETEKQTE+ATRVSTWKQ IE  LEEQD    FDIHEYG  +L
Sbjct: 469 LDALLASIAETEKQTEMATRVSTWKQNIEHNLEEQDKHHSFDIHEYGQAIL 519


>ref|XP_004144909.1| PREDICTED: condensin-2 complex subunit H2-like [Cucumis sativus]
          Length = 593

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/111 (55%), Positives = 75/111 (67%)
 Frame = -2

Query: 334 IPDFGQDDFTMPEVENTFMDAEGPPNHENPDGDFHFSSDDVFQPEDVPSHASLEDLCRSH 155
           +PD    D   P   + FMD      +E  D   HF + + ++PE   S +SLEDLCRSH
Sbjct: 385 MPDVNHPDIGDPN--DHFMDEAMCFGNEKHDVAAHFDNGEAYEPEFPDSRSSLEDLCRSH 442

Query: 154 LDSLLASIAETEKQTELATRVSTWKQRIESTLEEQDSRPPFDIHEYGTRVL 2
           LD+LLASIAE+EKQTE+ATRVSTWKQ IE  LE+QD  PPFDIHEYG  +L
Sbjct: 443 LDALLASIAESEKQTEMATRVSTWKQNIEHNLEDQDKHPPFDIHEYGQAIL 493


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