BLASTX nr result

ID: Coptis25_contig00038549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038549
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19348.3| unnamed protein product [Vitis vinifera]              233   1e-59
emb|CAN62567.1| hypothetical protein VITISV_022764 [Vitis vinifera]   223   1e-56
gb|AFI80887.1| R2R3-MYB transcription factor MYB1.1 [Quercus sub...   222   2e-56
emb|CBI41089.3| unnamed protein product [Vitis vinifera]              222   2e-56
gb|AFI81249.1| R2R3-MYB transcription factor MYB1.2 [Quercus suber]   222   3e-56

>emb|CBI19348.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  233 bits (594), Expect = 1e-59
 Identities = 108/156 (69%), Positives = 126/156 (80%)
 Frame = -3

Query: 488 LPQKIGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDHIICNLYLNIGSRWSIIAAQLPGR 309
           LPQKIGLKRCGKSCRLRWLNYLRPN++HGGFSEEED+IIC+LY++IGSRWS+IAAQLPGR
Sbjct: 41  LPQKIGLKRCGKSCRLRWLNYLRPNIRHGGFSEEEDNIICSLYISIGSRWSVIAAQLPGR 100

Query: 308 TDNDIKNYWNTXXXXXXXXKQRKEHQARRASYLKQDMKNGGDIPIYADLGMQTPYWPEPP 129
           TDNDIKNYWNT        KQRKE QARR S  KQ+MK      + +D     PYWPE P
Sbjct: 101 TDNDIKNYWNTRLKKKLLGKQRKEQQARRGSCPKQEMKRASGNAMVSDNENLNPYWPELP 160

Query: 128 MPISTPYPNQDNRFNDHASLKKLLIKLGGRFSDDHQ 21
           +P   PYPN++ RFNDH+S+++LLI+LGGRFSDD Q
Sbjct: 161 VPAPIPYPNEEPRFNDHSSIRRLLIRLGGRFSDDGQ 196


>emb|CAN62567.1| hypothetical protein VITISV_022764 [Vitis vinifera]
          Length = 330

 Score =  223 bits (569), Expect = 1e-56
 Identities = 103/151 (68%), Positives = 121/151 (80%)
 Frame = -3

Query: 473 GLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDHIICNLYLNIGSRWSIIAAQLPGRTDNDI 294
           GLKRCGKSCRLRWLNYLRPN++HGGFSEEED+IIC+LY++IGSRWS+IAAQLPGRTDNDI
Sbjct: 36  GLKRCGKSCRLRWLNYLRPNIRHGGFSEEEDNIICSLYISIGSRWSVIAAQLPGRTDNDI 95

Query: 293 KNYWNTXXXXXXXXKQRKEHQARRASYLKQDMKNGGDIPIYADLGMQTPYWPEPPMPIST 114
           KNYWNT        KQRKE QARR S  KQ+MK      + +D     PYWPE P+P   
Sbjct: 96  KNYWNTRLKKKLLGKQRKEQQARRGSCPKQEMKRASGNAMVSDNENLNPYWPELPVPAPI 155

Query: 113 PYPNQDNRFNDHASLKKLLIKLGGRFSDDHQ 21
           PYPN++ RFNDH+S+++LLI+LGGRFSDD Q
Sbjct: 156 PYPNEEPRFNDHSSIRRLLIRLGGRFSDDGQ 186


>gb|AFI80887.1| R2R3-MYB transcription factor MYB1.1 [Quercus suber]
           gi|385843182|gb|AFI80888.1| R2R3-MYB transcription
           factor MYB1.2 [Quercus suber]
           gi|385845759|gb|AFI81248.1| R2R3-MYB transcription
           factor MYB1.1 [Quercus suber]
          Length = 346

 Score =  222 bits (566), Expect = 2e-56
 Identities = 109/154 (70%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
 Frame = -3

Query: 488 LPQKIGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDHIICNLYLNIGSRWSIIAAQLPGR 309
           LPQKIGLKRCGKSCRLRWLNYLRPN+KHGGFSEEED+IIC+LY++IGSRWSIIAAQLPGR
Sbjct: 41  LPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGR 100

Query: 308 TDNDIKNYWNTXXXXXXXXKQRKEHQARR-ASYLKQDMKNGGDIPIYADLGMQTPYWPEP 132
           TDNDIK+YWNT        KQRKE QARR  S LKQ+MK G ++ +  +   Q PYWPE 
Sbjct: 101 TDNDIKDYWNTRLKKRLLGKQRKEQQARRGTSSLKQEMKRGVEM-VSDNNNNQNPYWPEL 159

Query: 131 PMPISTPYPNQDNRFNDHASLKKLLIKLGGRFSD 30
           P+    P+ NQ+ RFNDHAS++K LIKLGGRFSD
Sbjct: 160 PVLAHIPFSNQEPRFNDHASIRKFLIKLGGRFSD 193


>emb|CBI41089.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score =  222 bits (566), Expect = 2e-56
 Identities = 109/163 (66%), Positives = 126/163 (77%), Gaps = 1/163 (0%)
 Frame = -3

Query: 488 LPQKIGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDHIICNLYLNIGSRWSIIAAQLPGR 309
           LPQKIGLKRCGKSCRLRWLNYLRPN+KHGGFSEEED+IIC+LY++IGSRWS+IA QLPGR
Sbjct: 41  LPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYISIGSRWSVIATQLPGR 100

Query: 308 TDNDIKNYWNTXXXXXXXXKQRKEHQARRASYLKQDMKNGGDIPIYADLGM-QTPYWPEP 132
           TDNDIKNYWNT        KQRKE QARRA+Y+KQ+MK    I +  D  + + PYW E 
Sbjct: 101 TDNDIKNYWNTRLKKKLLGKQRKEQQARRANYVKQEMKREPGIFVVPDQAVGRNPYWAE- 159

Query: 131 PMPISTPYPNQDNRFNDHASLKKLLIKLGGRFSDDHQQQNDNA 3
            +P  + +PNQD    D AS+KKLLIKLGGRF DD QQ   N+
Sbjct: 160 -LPAVSVHPNQDPDIKDQASIKKLLIKLGGRFGDDGQQPGSNS 201


>gb|AFI81249.1| R2R3-MYB transcription factor MYB1.2 [Quercus suber]
          Length = 346

 Score =  222 bits (565), Expect = 3e-56
 Identities = 108/154 (70%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
 Frame = -3

Query: 488 LPQKIGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDHIICNLYLNIGSRWSIIAAQLPGR 309
           LPQKIGLKRCGKSCRLRWLNYLRPN+KHGGFSEEED++IC+LY++IGSRWSIIAAQLPGR
Sbjct: 41  LPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNVICSLYISIGSRWSIIAAQLPGR 100

Query: 308 TDNDIKNYWNTXXXXXXXXKQRKEHQARR-ASYLKQDMKNGGDIPIYADLGMQTPYWPEP 132
           TDNDIK+YWNT        KQRKE QARR  S LKQ+MK G ++ +  +   Q PYWPE 
Sbjct: 101 TDNDIKDYWNTRLKKRLLGKQRKEQQARRGTSSLKQEMKRGVEM-VSDNNNNQNPYWPEL 159

Query: 131 PMPISTPYPNQDNRFNDHASLKKLLIKLGGRFSD 30
           P+    P+ NQ+ RFNDHAS++K LIKLGGRFSD
Sbjct: 160 PVLAHIPFSNQEPRFNDHASIRKFLIKLGGRFSD 193


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