BLASTX nr result

ID: Coptis25_contig00038528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038528
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA37283.1| TPA: hypothetical protein ZEAMMB73_202347 [Zea m...    61   1e-07
ref|NP_001131742.1| uncharacterized protein LOC100193108 [Zea ma...    61   1e-07
ref|XP_002446681.1| hypothetical protein SORBIDRAFT_06g020470 [S...    60   1e-07
gb|EAZ20206.1| hypothetical protein OsJ_35804 [Oryza sativa Japo...    60   2e-07
ref|NP_001066596.1| Os12g0289600 [Oryza sativa Japonica Group] g...    60   2e-07

>tpg|DAA37283.1| TPA: hypothetical protein ZEAMMB73_202347 [Zea mays]
          Length = 814

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/77 (35%), Positives = 47/77 (61%)
 Frame = +3

Query: 60  QEQENQQPSCFPKKVRFQRRLSSGADSRAICLRIRPLNKLGLSFPHKSSFETFFCISDPC 239
           Q++ + QP+CF + ++ Q++L S   +  ICLR++P NK  + F  K  F+T+FC  +P 
Sbjct: 717 QQEPDLQPNCFSRTLKLQKKLLSSGAAHTICLRVQPHNK--MDFLPKKEFDTYFCAYEPY 774

Query: 240 NLCSGSDAFSDSSNNED 290
             C  SD+ +  S+ +D
Sbjct: 775 EQCPRSDSRATYSSRDD 791


>ref|NP_001131742.1| uncharacterized protein LOC100193108 [Zea mays]
           gi|194692402|gb|ACF80285.1| unknown [Zea mays]
          Length = 153

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/77 (35%), Positives = 47/77 (61%)
 Frame = +3

Query: 60  QEQENQQPSCFPKKVRFQRRLSSGADSRAICLRIRPLNKLGLSFPHKSSFETFFCISDPC 239
           Q++ + QP+CF + ++ Q++L S   +  ICLR++P NK  + F  K  F+T+FC  +P 
Sbjct: 56  QQEPDLQPNCFSRTLKLQKKLLSSGAAHTICLRVQPHNK--MDFLPKKEFDTYFCAYEPY 113

Query: 240 NLCSGSDAFSDSSNNED 290
             C  SD+ +  S+ +D
Sbjct: 114 EQCPRSDSRATYSSRDD 130


>ref|XP_002446681.1| hypothetical protein SORBIDRAFT_06g020470 [Sorghum bicolor]
           gi|241937864|gb|EES11009.1| hypothetical protein
           SORBIDRAFT_06g020470 [Sorghum bicolor]
          Length = 855

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/79 (39%), Positives = 49/79 (62%)
 Frame = +3

Query: 54  SIQEQENQQPSCFPKKVRFQRRLSSGADSRAICLRIRPLNKLGLSFPHKSSFETFFCISD 233
           SIQE +  QP+CF + ++ Q++L S   +  ICLRI+P NK  + F  K  F+T+FC  +
Sbjct: 757 SIQEPD-LQPNCFSRTLKLQKKLLSSGAAHTICLRIQPHNK--MDFLPKKEFDTYFCAYE 813

Query: 234 PCNLCSGSDAFSDSSNNED 290
           P   CS S++ +  S+ +D
Sbjct: 814 PYEQCSRSNSRATYSSRDD 832


>gb|EAZ20206.1| hypothetical protein OsJ_35804 [Oryza sativa Japonica Group]
          Length = 949

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/87 (35%), Positives = 51/87 (58%)
 Frame = +3

Query: 30   VKRETQLLSIQEQENQQPSCFPKKVRFQRRLSSGADSRAICLRIRPLNKLGLSFPHKSSF 209
            V  + +  SIQE +  QP+CF + ++ Q+R  S   +  ICL+I+P NK  + F  K  F
Sbjct: 864  VSEQGRFDSIQEPD-LQPNCFSRTLKLQKRFFSSDAAHTICLKIQPHNK--MDFLPKKEF 920

Query: 210  ETFFCISDPCNLCSGSDAFSDSSNNED 290
            +T+FC  +P   CS S++ +  S+ +D
Sbjct: 921  DTYFCAYEPYEQCSRSNSHATCSSRDD 947


>ref|NP_001066596.1| Os12g0289600 [Oryza sativa Japonica Group]
           gi|113649103|dbj|BAF29615.1| Os12g0289600 [Oryza sativa
           Japonica Group]
          Length = 235

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/87 (35%), Positives = 51/87 (58%)
 Frame = +3

Query: 30  VKRETQLLSIQEQENQQPSCFPKKVRFQRRLSSGADSRAICLRIRPLNKLGLSFPHKSSF 209
           V  + +  SIQE +  QP+CF + ++ Q+R  S   +  ICL+I+P NK  + F  K  F
Sbjct: 129 VSEQGRFDSIQEPD-LQPNCFSRTLKLQKRFFSSDAAHTICLKIQPHNK--MDFLPKKEF 185

Query: 210 ETFFCISDPCNLCSGSDAFSDSSNNED 290
           +T+FC  +P   CS S++ +  S+ +D
Sbjct: 186 DTYFCAYEPYEQCSRSNSHATCSSRDD 212


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