BLASTX nr result

ID: Coptis25_contig00038505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038505
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18453.1| unknown [Picea sitchensis]                             192   2e-47
ref|XP_002960078.1| hypothetical protein SELMODRAFT_74261 [Selag...   184   5e-45
ref|XP_002984063.1| hypothetical protein SELMODRAFT_180688 [Sela...   184   5e-45
ref|XP_002521265.1| Phytoene dehydrogenase, putative [Ricinus co...   184   8e-45
ref|XP_002278046.2| PREDICTED: phytoene dehydrogenase-like [Viti...   180   9e-44

>gb|ABR18453.1| unknown [Picea sitchensis]
          Length = 574

 Score =  192 bits (488), Expect = 2e-47
 Identities = 91/133 (68%), Positives = 103/133 (77%), Gaps = 5/133 (3%)
 Frame = -2

Query: 389 SAHHLSRQGFDVTLLEADYLPGS-----KYTPGSSADNGIQGFWYPYRNIFSLVDELGIK 225
           +AHHLS+QGFDVTLLEA   PG      K   G S + GI GFWYPYRNIF+L+DELGI+
Sbjct: 92  AAHHLSKQGFDVTLLEAGRQPGGLVAGWKSASGRSVEVGIHGFWYPYRNIFALIDELGIQ 151

Query: 224 PFINWTRSALYSPEGLEIEFPIYQDQPQWPTPFGTFLYTQHLRLPLVDRLTSLPLMTGVI 45
           PF NWTRSA YSP GLE+E PI+QD P+ P+P GTF+YTQ  RLPL DRLTSLPLM  VI
Sbjct: 152 PFTNWTRSAQYSPNGLEVESPIFQDLPRLPSPLGTFIYTQFQRLPLADRLTSLPLMYAVI 211

Query: 44  DFDNTDTVWRKYD 6
           DFDNTD  W+KYD
Sbjct: 212 DFDNTDNAWKKYD 224


>ref|XP_002960078.1| hypothetical protein SELMODRAFT_74261 [Selaginella moellendorffii]
           gi|300171017|gb|EFJ37617.1| hypothetical protein
           SELMODRAFT_74261 [Selaginella moellendorffii]
          Length = 530

 Score =  184 bits (468), Expect = 5e-45
 Identities = 87/133 (65%), Positives = 102/133 (76%), Gaps = 5/133 (3%)
 Frame = -2

Query: 389 SAHHLSRQGFDVTLLEADYLPGS-----KYTPGSSADNGIQGFWYPYRNIFSLVDELGIK 225
           +AHHL +QGFDVTL+EA   PG      K   G S + GI GFWYPY+NIFSLVDELG+K
Sbjct: 52  AAHHLLKQGFDVTLIEAGAQPGGLVAGWKTASGRSVEVGIHGFWYPYKNIFSLVDELGLK 111

Query: 224 PFINWTRSALYSPEGLEIEFPIYQDQPQWPTPFGTFLYTQHLRLPLVDRLTSLPLMTGVI 45
           PF  WTRS+ YSP GLE+E PI+QD P+ P+P GTF+YTQ LRLPL DRLT+LPLM  V+
Sbjct: 112 PFTKWTRSSQYSPNGLEVESPIFQDLPRLPSPLGTFVYTQFLRLPLWDRLTALPLMYTVV 171

Query: 44  DFDNTDTVWRKYD 6
           DFDN+D  WRKYD
Sbjct: 172 DFDNSDRAWRKYD 184


>ref|XP_002984063.1| hypothetical protein SELMODRAFT_180688 [Selaginella moellendorffii]
           gi|300148415|gb|EFJ15075.1| hypothetical protein
           SELMODRAFT_180688 [Selaginella moellendorffii]
          Length = 527

 Score =  184 bits (468), Expect = 5e-45
 Identities = 87/133 (65%), Positives = 102/133 (76%), Gaps = 5/133 (3%)
 Frame = -2

Query: 389 SAHHLSRQGFDVTLLEADYLPGS-----KYTPGSSADNGIQGFWYPYRNIFSLVDELGIK 225
           +AHHL +QGFDVTL+EA   PG      K   G S + GI GFWYPY+NIFSLVDELG+K
Sbjct: 52  AAHHLIKQGFDVTLIEAGAQPGGLVAGWKTASGRSVEVGIHGFWYPYKNIFSLVDELGLK 111

Query: 224 PFINWTRSALYSPEGLEIEFPIYQDQPQWPTPFGTFLYTQHLRLPLVDRLTSLPLMTGVI 45
           PF  WTRS+ YSP GLE+E PI+QD P+ P+P GTF+YTQ LRLPL DRLT+LPLM  V+
Sbjct: 112 PFTKWTRSSQYSPNGLEVESPIFQDLPRLPSPLGTFVYTQFLRLPLWDRLTALPLMYTVV 171

Query: 44  DFDNTDTVWRKYD 6
           DFDN+D  WRKYD
Sbjct: 172 DFDNSDRAWRKYD 184


>ref|XP_002521265.1| Phytoene dehydrogenase, putative [Ricinus communis]
           gi|223539533|gb|EEF41121.1| Phytoene dehydrogenase,
           putative [Ricinus communis]
          Length = 530

 Score =  184 bits (466), Expect = 8e-45
 Identities = 91/129 (70%), Positives = 99/129 (76%)
 Frame = -2

Query: 389 SAHHLSRQGFDVTLLEADYLPGSKYTPGSSADNGIQGFWYPYRNIFSLVDELGIKPFINW 210
           +AHHL  QGF+VT+LE D         GS  D GIQGFW PY+NIFSLV+ELGI PF N 
Sbjct: 60  AAHHLCNQGFNVTVLEDDVF-------GSPDDVGIQGFWNPYQNIFSLVNELGITPFTNR 112

Query: 209 TRSALYSPEGLEIEFPIYQDQPQWPTPFGTFLYTQHLRLPLVDRLTSLPLMTGVIDFDNT 30
            RSALYS EGLE+EFP++QDQPQ PTP GT  YTQ  RLPLVDRLTSLPLM  VIDFDNT
Sbjct: 113 IRSALYSSEGLEVEFPVFQDQPQLPTPLGTLYYTQFTRLPLVDRLTSLPLMAAVIDFDNT 172

Query: 29  DTVWRKYDS 3
           DT WRKYDS
Sbjct: 173 DTAWRKYDS 181


>ref|XP_002278046.2| PREDICTED: phytoene dehydrogenase-like [Vitis vinifera]
          Length = 530

 Score =  180 bits (457), Expect = 9e-44
 Identities = 88/129 (68%), Positives = 99/129 (76%)
 Frame = -2

Query: 389 SAHHLSRQGFDVTLLEADYLPGSKYTPGSSADNGIQGFWYPYRNIFSLVDELGIKPFINW 210
           +AHHL +QGF+VT+LE    P S+       D GI GFWYPYRNIFSLVDEL IKPF NW
Sbjct: 53  AAHHLCKQGFEVTVLEGGNDPESRKMLIPD-DVGIHGFWYPYRNIFSLVDELDIKPFTNW 111

Query: 209 TRSALYSPEGLEIEFPIYQDQPQWPTPFGTFLYTQHLRLPLVDRLTSLPLMTGVIDFDNT 30
           T SA YS EGLE+EFPI+QD  Q PTP GT  YTQ +RLPL+DRL+SLPLM  V+DFDNT
Sbjct: 112 TSSAHYSGEGLEVEFPIFQDLTQLPTPLGTLFYTQFVRLPLLDRLSSLPLMAAVVDFDNT 171

Query: 29  DTVWRKYDS 3
           DT WRKYDS
Sbjct: 172 DTAWRKYDS 180


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