BLASTX nr result
ID: Coptis25_contig00038496
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038496 (928 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002297821.1| predicted protein [Populus trichocarpa] gi|2... 69 2e-09 ref|XP_002518130.1| conserved hypothetical protein [Ricinus comm... 58 4e-06 >ref|XP_002297821.1| predicted protein [Populus trichocarpa] gi|222845079|gb|EEE82626.1| predicted protein [Populus trichocarpa] Length = 106 Score = 68.6 bits (166), Expect = 2e-09 Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 5/69 (7%) Frame = +3 Query: 312 PLKSNLKKATTV----DQVEMRTGSRKVNWPD-AHGKDIAHVQQIESSTNGLEDGKLEGL 476 PLKS LKK T +Q RKV+WPD AHG DIAHV + ESST+ +DG+LEG+ Sbjct: 40 PLKSTLKKTTNAIVGENQARKDHQKRKVSWPDIAHGTDIAHVLEFESSTS--DDGELEGV 97 Query: 477 TNSCTCAIQ 503 NSC C IQ Sbjct: 98 RNSCVCTIQ 106 >ref|XP_002518130.1| conserved hypothetical protein [Ricinus communis] gi|223542726|gb|EEF44263.1| conserved hypothetical protein [Ricinus communis] Length = 202 Score = 57.8 bits (138), Expect = 4e-06 Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 4/62 (6%) Frame = +3 Query: 300 TTNLPLKSNLKKATTV----DQVEMRTGSRKVNWPDAHGKDIAHVQQIESSTNGLEDGKL 467 TT LKSNLK+ TT + + RKV+WPDAHGKDIAHV + E S + E G+L Sbjct: 111 TTAATLKSNLKRTTTAVLEENNQSRKAEKRKVSWPDAHGKDIAHVHEFEPSIS--EYGEL 168 Query: 468 EG 473 EG Sbjct: 169 EG 170