BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038477
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4...   120   1e-25
ref|XP_002510221.1| chlorophyll A/B binding protein, putative [R...   120   2e-25
ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7...   118   6e-25
ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago tr...   117   7e-25
ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Po...   116   2e-24

>ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
           [Cucumis sativus] gi|449522610|ref|XP_004168319.1|
           PREDICTED: chlorophyll a-b binding protein 4,
           chloroplastic-like [Cucumis sativus]
          Length = 259

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/91 (63%), Positives = 68/91 (74%)
 Frame = +2

Query: 2   GSFFGLEAAXXXXXXXXXXXXXXXXXXXAKDIKSANEWKLKEIKNGRLAMVAMLGFFVQA 181
           G+FFGLEAA                   AKDIK+A++WKLKEIKNGRLAMVAMLG FVQA
Sbjct: 168 GTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQA 227

Query: 182 YVTHAGPVDNLLTHLSDPWHRTLIQTLADSS 274
           YVTH GP+DNL+ HLS+PWH+T+IQTL+ SS
Sbjct: 228 YVTHTGPIDNLVEHLSNPWHKTIIQTLSSSS 258


>ref|XP_002510221.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223550922|gb|EEF52408.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 269

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/92 (64%), Positives = 67/92 (72%)
 Frame = +2

Query: 2   GSFFGLEAAXXXXXXXXXXXXXXXXXXXAKDIKSANEWKLKEIKNGRLAMVAMLGFFVQA 181
           GSFFG+EAA                   AKDI+SA +WKLKEIKNGRLAMVAMLG FVQA
Sbjct: 178 GSFFGMEAALEGLEPGYPGGPLLNPFGLAKDIRSARDWKLKEIKNGRLAMVAMLGIFVQA 237

Query: 182 YVTHAGPVDNLLTHLSDPWHRTLIQTLADSSS 277
            VTH GP+DNLL HLSDPWH+T+IQTL+ S+S
Sbjct: 238 AVTHTGPIDNLLEHLSDPWHKTIIQTLSHSTS 269


>ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
           [Glycine max]
          Length = 263

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/92 (63%), Positives = 68/92 (73%)
 Frame = +2

Query: 2   GSFFGLEAAXXXXXXXXXXXXXXXXXXXAKDIKSANEWKLKEIKNGRLAMVAMLGFFVQA 181
           GSFFGLEA+                   AKDI +A++WKLKEIKNGRLAMVAMLG FVQA
Sbjct: 172 GSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLGIFVQA 231

Query: 182 YVTHAGPVDNLLTHLSDPWHRTLIQTLADSSS 277
            VTH GP+DNL+ HLS+PWH+T+IQTLA+SSS
Sbjct: 232 SVTHVGPIDNLVEHLSNPWHKTIIQTLANSSS 263


>ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago truncatula]
           gi|355492086|gb|AES73289.1| Chlorophyll a-b binding
           protein [Medicago truncatula]
          Length = 267

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/92 (64%), Positives = 66/92 (71%)
 Frame = +2

Query: 2   GSFFGLEAAXXXXXXXXXXXXXXXXXXXAKDIKSANEWKLKEIKNGRLAMVAMLGFFVQA 181
           GSFFGLEA+                   AKDIKSA EWKLKEIKNGRLAMVA+LG FVQA
Sbjct: 176 GSFFGLEASLGGLEPGYPGGPLLNPLGLAKDIKSAREWKLKEIKNGRLAMVAILGIFVQA 235

Query: 182 YVTHAGPVDNLLTHLSDPWHRTLIQTLADSSS 277
            VTH GP+DNL+ HLS+PWH+T+IQ LA SSS
Sbjct: 236 SVTHVGPIDNLVEHLSNPWHKTIIQILASSSS 267


>ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
           gi|222835451|gb|EEE73886.1| light-harvesting complex I
           protein Lhca5 [Populus trichocarpa]
          Length = 266

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/92 (61%), Positives = 68/92 (73%)
 Frame = +2

Query: 2   GSFFGLEAAXXXXXXXXXXXXXXXXXXXAKDIKSANEWKLKEIKNGRLAMVAMLGFFVQA 181
           GSFFGLE+A                   A+DI++A+ WKLKEIKNGRLAMVAM+G FVQA
Sbjct: 175 GSFFGLESALEGLEPGYPGGPLLNPLGLARDIENAHVWKLKEIKNGRLAMVAMVGIFVQA 234

Query: 182 YVTHAGPVDNLLTHLSDPWHRTLIQTLADSSS 277
            VTHAGP+DNL+ HLS+PWHRT+IQTLA+S S
Sbjct: 235 AVTHAGPIDNLIEHLSNPWHRTIIQTLANSGS 266