BLASTX nr result

ID: Coptis25_contig00038473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038473
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27457.3| unnamed protein product [Vitis vinifera]              221   7e-56
ref|XP_002273118.1| PREDICTED: BTB/POZ domain-containing protein...   221   7e-56
ref|XP_002515801.1| protein binding protein, putative [Ricinus c...   199   5e-49
ref|XP_002315064.1| predicted protein [Populus trichocarpa] gi|2...   185   7e-45
emb|CBG76260.1| OO_Ba0005L10-OO_Ba0081K17.11 [Oryza officinalis]      177   1e-42

>emb|CBI27457.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  221 bits (564), Expect = 7e-56
 Identities = 104/193 (53%), Positives = 145/193 (75%)
 Frame = +1

Query: 34  MKELNDHVQVHINGEHSFLLNKRIMCKYSGKLMKMIKQENKNTHMKNRAVEVNEFPGGAN 213
           M EL D +Q+H+N + +F +N++I+ KYSG+L K+IKQE + T +KN  +++++FPGGA+
Sbjct: 1   MPELCD-LQIHVNAQQTFFVNEKIISKYSGRLKKVIKQEKRRTQIKNSGIDIDDFPGGAD 59

Query: 214 GFELVSRFCYNNGRIQITPTNISILYCSAIFLEMTEKISPCNLIQKTENFLEGLFYWSWA 393
           GFELVSRFCYN+G+I +T +N+S+L+C A+FL MTEK+SPCNL+Q+TE FLEG+FYWSW 
Sbjct: 60  GFELVSRFCYNHGKITVTVSNVSLLHCCAVFLGMTEKVSPCNLLQQTETFLEGMFYWSWN 119

Query: 394 DILIALKSCECLFSWAESFGLLHKLISSLIAKISQNSDFMLTXXXXXXXXXXXXXXXXXG 573
           DIL++LKSCE  FS+A+S GLL KLI +L+AK +QNSD +L                  G
Sbjct: 120 DILVSLKSCESFFSYADSSGLLEKLIGALLAKFAQNSDIIL---IAPSSSSSSSPETTSG 176

Query: 574 FRLSFSSKATPSS 612
           F+ S S+K TP S
Sbjct: 177 FQFSSSTKNTPQS 189


>ref|XP_002273118.1| PREDICTED: BTB/POZ domain-containing protein At3g19850 [Vitis
           vinifera]
          Length = 538

 Score =  221 bits (564), Expect = 7e-56
 Identities = 104/193 (53%), Positives = 145/193 (75%)
 Frame = +1

Query: 34  MKELNDHVQVHINGEHSFLLNKRIMCKYSGKLMKMIKQENKNTHMKNRAVEVNEFPGGAN 213
           M EL D +Q+H+N + +F +N++I+ KYSG+L K+IKQE + T +KN  +++++FPGGA+
Sbjct: 1   MPELCD-LQIHVNAQQTFFVNEKIISKYSGRLKKVIKQEKRRTQIKNSGIDIDDFPGGAD 59

Query: 214 GFELVSRFCYNNGRIQITPTNISILYCSAIFLEMTEKISPCNLIQKTENFLEGLFYWSWA 393
           GFELVSRFCYN+G+I +T +N+S+L+C A+FL MTEK+SPCNL+Q+TE FLEG+FYWSW 
Sbjct: 60  GFELVSRFCYNHGKITVTVSNVSLLHCCAVFLGMTEKVSPCNLLQQTETFLEGMFYWSWN 119

Query: 394 DILIALKSCECLFSWAESFGLLHKLISSLIAKISQNSDFMLTXXXXXXXXXXXXXXXXXG 573
           DIL++LKSCE  FS+A+S GLL KLI +L+AK +QNSD +L                  G
Sbjct: 120 DILVSLKSCESFFSYADSSGLLEKLIGALLAKFAQNSDIIL---IAPSSSSSSSPETTSG 176

Query: 574 FRLSFSSKATPSS 612
           F+ S S+K TP S
Sbjct: 177 FQFSSSTKNTPQS 189


>ref|XP_002515801.1| protein binding protein, putative [Ricinus communis]
           gi|223545070|gb|EEF46582.1| protein binding protein,
           putative [Ricinus communis]
          Length = 535

 Score =  199 bits (505), Expect = 5e-49
 Identities = 94/193 (48%), Positives = 140/193 (72%), Gaps = 6/193 (3%)
 Frame = +1

Query: 55  VQVHINGEHSFLLNKRIMCKYSGKLMKMIKQENKNTHMKNRAVEVNEFPGGANGFELVSR 234
           + +H+NG+ +F LN++++  YSGKL K+I+QE + + +KN ++E+ +FPGG +GFE+VSR
Sbjct: 6   LSIHVNGQQTFFLNQKVVSAYSGKLKKIIRQEKRKSQIKNLSIEIGDFPGGPDGFEMVSR 65

Query: 235 FCYNNGRIQITPTNISILYCSAIFLEMTEKISPCNLIQKTENFLEGLFYWSWADILIALK 414
           FCY++GRI+IT  N+ +L+C AIFL MTEK+SP NL+++TE+FLEG+FYWSW +IL  L+
Sbjct: 66  FCYHDGRIEITVMNVCLLHCCAIFLGMTEKVSPSNLLKQTESFLEGIFYWSWNNILATLR 125

Query: 415 SCECLFSWAESFGLLHKLISSLIAKISQNSDFMLTXXXXXXXXXXXXXXXXXGFRLSFSS 594
           SCE  F++A+S+G++ KLI +L+AKI+Q+SD +                   GFRLS S+
Sbjct: 126 SCESFFTYADSYGVVQKLIYALLAKIAQHSDSV--SLLASSSSSSSSPETASGFRLSSSA 183

Query: 595 K------ATPSSG 615
           K      A PSSG
Sbjct: 184 KTGTPTSAKPSSG 196


>ref|XP_002315064.1| predicted protein [Populus trichocarpa] gi|222864104|gb|EEF01235.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score =  185 bits (469), Expect = 7e-45
 Identities = 92/201 (45%), Positives = 137/201 (68%), Gaps = 3/201 (1%)
 Frame = +1

Query: 34  MKELNDHVQVHINGEHSFLLNKRIMCKYSGKLMKMIKQENKNTHMKNRAVEVNEFPGGAN 213
           M +L D V +H+NG+  F LN++I+  YSGKL K+I +E + + +KN ++ ++ FPGG +
Sbjct: 1   MPQLCDLV-IHVNGQQIFFLNQKILSAYSGKLKKIIGKEKRKSQIKNLSIGIDNFPGGPD 59

Query: 214 GFELVSRFCYNNGRIQITPTNISILYCSAIFLEMTEKISPCNLIQKTENFLEGLFYWSWA 393
           GFE+VSRFCYN+G+I+IT +N+++L+C A+FL MTE +SP NL+++TE FL+G+ +WSW 
Sbjct: 60  GFEMVSRFCYNHGKIKITVSNVALLHCCAVFLGMTENLSPGNLLKQTETFLDGMIHWSWH 119

Query: 394 DILIALKSCECLFSWAESFGLLHKLISSLIAKISQNSDFMLTXXXXXXXXXXXXXXXXXG 573
           DI+ +LKSCE  F+  ++ GL+ KLI SL+ K++QNSD  +                   
Sbjct: 120 DIIASLKSCESFFTCTDTSGLVEKLIRSLLEKLAQNSD--IATLIASSSSSSSSPETASR 177

Query: 574 FRLSFSSKATPSS---GISSK 627
           FR S S+K TP S   G SSK
Sbjct: 178 FRFSSSAKTTPESTKPGSSSK 198


>emb|CBG76260.1| OO_Ba0005L10-OO_Ba0081K17.11 [Oryza officinalis]
          Length = 556

 Score =  177 bits (450), Expect = 1e-42
 Identities = 85/164 (51%), Positives = 123/164 (75%), Gaps = 6/164 (3%)
 Frame = +1

Query: 34  MKELNDHVQVHINGEHSFLLNKRIMCKYSGKLMKMIKQENKNTHMK--NR----AVEVNE 195
           M EL D ++VHING H+ LL++ IMC +SG+L  M+ QE K       NR    +V++ +
Sbjct: 1   MNELCD-LKVHINGHHTLLLHQSIMCAFSGRLRTMVTQEKKKKKKTKANRVDALSVKLAD 59

Query: 196 FPGGANGFELVSRFCYNNGRIQITPTNISILYCSAIFLEMTEKISPCNLIQKTENFLEGL 375
           FPGGA GFELV+RFCYNNGR+ + P+N+ +L+C+A+FLEMTE++  CNL+ + E F++GL
Sbjct: 60  FPGGAEGFELVARFCYNNGRVPLCPSNLPLLHCAAVFLEMTEEVCTCNLLTQAEAFVDGL 119

Query: 376 FYWSWADILIALKSCECLFSWAESFGLLHKLISSLIAKISQNSD 507
           +YW+WAD+L A+KSCE L + A++ GLL KLIS+L +KI+ N +
Sbjct: 120 YYWTWADVLAAVKSCEPLAAAADASGLLEKLISALFSKITANPE 163


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