BLASTX nr result

ID: Coptis25_contig00038450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038450
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603106.1| hypothetical protein MTR_3g103950, partial [...    78   8e-13
gb|AAZ79232.1| putative xylanase Xyn1 [Nicotiana tabacum]              77   1e-12
gb|AAZ79233.1| putative xylanase Xyn2 [Nicotiana tabacum]              77   2e-12
ref|XP_004158975.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cu...    74   2e-11
ref|XP_004146424.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cu...    74   2e-11

>ref|XP_003603106.1| hypothetical protein MTR_3g103950, partial [Medicago truncatula]
           gi|355492154|gb|AES73357.1| hypothetical protein
           MTR_3g103950, partial [Medicago truncatula]
          Length = 93

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
 Frame = -1

Query: 249 NTKCLKQHFQRLQMGGGTIDEENIILNPRFDDGLSHWSGRGQGNPFIVEKFV---KILPV 79
           NTKC+            + D+ENIILNP F+DGL++W+GRG      V + +   KILP 
Sbjct: 18  NTKCV------------STDDENIILNPEFEDGLNNWTGRGC--KIAVHESMANGKILPK 63

Query: 78  SGQYFSYTTNRTETWHGIQQEITGRV 1
           SG++F+  T RT++W+GIQQEITGRV
Sbjct: 64  SGKFFASATERTQSWNGIQQEITGRV 89


>gb|AAZ79232.1| putative xylanase Xyn1 [Nicotiana tabacum]
          Length = 918

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = -1

Query: 192 DEENIILNPRFDDGLSHWSGRG---QGNPFIVEKFVKILPVSGQYFSYTTNRTETWHGIQ 22
           D++NII+NP+FDDGL+ WSGRG     +  + +   KI P+SG+YF+  T RT+TW+GIQ
Sbjct: 202 DDDNIIVNPQFDDGLNSWSGRGCKVVSHDSMADG--KITPMSGKYFASATERTQTWNGIQ 259

Query: 21  QEITGRV 1
           Q+ITGRV
Sbjct: 260 QDITGRV 266


>gb|AAZ79233.1| putative xylanase Xyn2 [Nicotiana tabacum]
          Length = 918

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/67 (53%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = -1

Query: 192 DEENIILNPRFDDGLSHWSGRG---QGNPFIVEKFVKILPVSGQYFSYTTNRTETWHGIQ 22
           D++NII+NP+FDDG++ WSGRG     +  + +   KI P+SG+YF+  T RT+TW+GIQ
Sbjct: 202 DDDNIIVNPQFDDGINSWSGRGCKVASHDSMADG--KITPMSGKYFASATERTQTWNGIQ 259

Query: 21  QEITGRV 1
           Q+ITGRV
Sbjct: 260 QDITGRV 266


>ref|XP_004158975.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cucumis sativus]
          Length = 905

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
 Frame = -1

Query: 207 GGGTIDEENIILNPRFDDGLSHWSGRGQGNPFIVEKFV---KILPVSGQYFSYTTNRTET 37
           G     +ENIILNP+FDD L +WS RG     +V   +   K+LP SG++F+  T RT++
Sbjct: 185 GKDNASDENIILNPKFDDDLKNWSARGC--KIVVHDSMGNGKVLPQSGKFFASATERTQS 242

Query: 36  WHGIQQEITGRV 1
           W+GIQQEITGRV
Sbjct: 243 WNGIQQEITGRV 254


>ref|XP_004146424.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cucumis sativus]
          Length = 913

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
 Frame = -1

Query: 207 GGGTIDEENIILNPRFDDGLSHWSGRGQGNPFIVEKFV---KILPVSGQYFSYTTNRTET 37
           G     +ENIILNP+FDD L +WS RG     +V   +   K+LP SG++F+  T RT++
Sbjct: 193 GKDNASDENIILNPKFDDDLKNWSARGC--KIVVHDSMGNGKVLPQSGKFFASATERTQS 250

Query: 36  WHGIQQEITGRV 1
           W+GIQQEITGRV
Sbjct: 251 WNGIQQEITGRV 262