BLASTX nr result
ID: Coptis25_contig00038450
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038450 (282 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003603106.1| hypothetical protein MTR_3g103950, partial [... 78 8e-13 gb|AAZ79232.1| putative xylanase Xyn1 [Nicotiana tabacum] 77 1e-12 gb|AAZ79233.1| putative xylanase Xyn2 [Nicotiana tabacum] 77 2e-12 ref|XP_004158975.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cu... 74 2e-11 ref|XP_004146424.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cu... 74 2e-11 >ref|XP_003603106.1| hypothetical protein MTR_3g103950, partial [Medicago truncatula] gi|355492154|gb|AES73357.1| hypothetical protein MTR_3g103950, partial [Medicago truncatula] Length = 93 Score = 77.8 bits (190), Expect = 8e-13 Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 3/86 (3%) Frame = -1 Query: 249 NTKCLKQHFQRLQMGGGTIDEENIILNPRFDDGLSHWSGRGQGNPFIVEKFV---KILPV 79 NTKC+ + D+ENIILNP F+DGL++W+GRG V + + KILP Sbjct: 18 NTKCV------------STDDENIILNPEFEDGLNNWTGRGC--KIAVHESMANGKILPK 63 Query: 78 SGQYFSYTTNRTETWHGIQQEITGRV 1 SG++F+ T RT++W+GIQQEITGRV Sbjct: 64 SGKFFASATERTQSWNGIQQEITGRV 89 >gb|AAZ79232.1| putative xylanase Xyn1 [Nicotiana tabacum] Length = 918 Score = 77.0 bits (188), Expect = 1e-12 Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 3/67 (4%) Frame = -1 Query: 192 DEENIILNPRFDDGLSHWSGRG---QGNPFIVEKFVKILPVSGQYFSYTTNRTETWHGIQ 22 D++NII+NP+FDDGL+ WSGRG + + + KI P+SG+YF+ T RT+TW+GIQ Sbjct: 202 DDDNIIVNPQFDDGLNSWSGRGCKVVSHDSMADG--KITPMSGKYFASATERTQTWNGIQ 259 Query: 21 QEITGRV 1 Q+ITGRV Sbjct: 260 QDITGRV 266 >gb|AAZ79233.1| putative xylanase Xyn2 [Nicotiana tabacum] Length = 918 Score = 76.6 bits (187), Expect = 2e-12 Identities = 36/67 (53%), Positives = 51/67 (76%), Gaps = 3/67 (4%) Frame = -1 Query: 192 DEENIILNPRFDDGLSHWSGRG---QGNPFIVEKFVKILPVSGQYFSYTTNRTETWHGIQ 22 D++NII+NP+FDDG++ WSGRG + + + KI P+SG+YF+ T RT+TW+GIQ Sbjct: 202 DDDNIIVNPQFDDGINSWSGRGCKVASHDSMADG--KITPMSGKYFASATERTQTWNGIQ 259 Query: 21 QEITGRV 1 Q+ITGRV Sbjct: 260 QDITGRV 266 >ref|XP_004158975.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cucumis sativus] Length = 905 Score = 73.6 bits (179), Expect = 2e-11 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%) Frame = -1 Query: 207 GGGTIDEENIILNPRFDDGLSHWSGRGQGNPFIVEKFV---KILPVSGQYFSYTTNRTET 37 G +ENIILNP+FDD L +WS RG +V + K+LP SG++F+ T RT++ Sbjct: 185 GKDNASDENIILNPKFDDDLKNWSARGC--KIVVHDSMGNGKVLPQSGKFFASATERTQS 242 Query: 36 WHGIQQEITGRV 1 W+GIQQEITGRV Sbjct: 243 WNGIQQEITGRV 254 >ref|XP_004146424.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cucumis sativus] Length = 913 Score = 73.6 bits (179), Expect = 2e-11 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%) Frame = -1 Query: 207 GGGTIDEENIILNPRFDDGLSHWSGRGQGNPFIVEKFV---KILPVSGQYFSYTTNRTET 37 G +ENIILNP+FDD L +WS RG +V + K+LP SG++F+ T RT++ Sbjct: 193 GKDNASDENIILNPKFDDDLKNWSARGC--KIVVHDSMGNGKVLPQSGKFFASATERTQS 250 Query: 36 WHGIQQEITGRV 1 W+GIQQEITGRV Sbjct: 251 WNGIQQEITGRV 262