BLASTX nr result

ID: Coptis25_contig00038449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038449
         (985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318448.1| predicted protein [Populus trichocarpa] gi|2...    60   6e-07

>ref|XP_002318448.1| predicted protein [Populus trichocarpa] gi|222859121|gb|EEE96668.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 62/193 (32%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
 Frame = -1

Query: 733 VDDAELALRLHRAINSSPRIFRNMRSVKLENLVDPKEVKLNASSLSRQSDPEKRVLNGEL 554
           VDD ELA RLHRAINSSPRI  N+  V    L   +  + N  +  R SD    +  G+L
Sbjct: 128 VDDFELAFRLHRAINSSPRISSNLCMVNSSCLGVARRGEGNGQTRIRNSDFRNPIACGKL 187

Query: 553 KVCTGNIGKAASGR-KSSESVSDIGPVKKSDHADCNIENPTKEEQASCSSKVAVSSENGN 377
                 + K+     + S  + D G ++ +   D N    +K  + S  SK+  S  N +
Sbjct: 188 ---DDFLSKSVDVECRKSNGIGD-GKIRPNAKKDGNAGKCSKMGEQSFFSKLIDSRGNDH 243

Query: 376 STDSGSQSCQKQEGSKLNSRETPCQSVYDKDSSEQEGKSPHGPDICLKMYSRRHKISKCI 197
           S +SGSQS +++     N   TP       D    +GKS    D  L  YSRR    + I
Sbjct: 244 SVNSGSQSFRER-----NESMTP-------DDKSCKGKS----DRYLLKYSRRKLDERII 287

Query: 196 LDQKNNLLPRNCH 158
            D     L    H
Sbjct: 288 PDGGPKFLYEGLH 300


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