BLASTX nr result

ID: Coptis25_contig00038448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038448
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252...    90   2e-16
emb|CBI23013.3| unnamed protein product [Vitis vinifera]               90   2e-16
emb|CAN73471.1| hypothetical protein VITISV_039356 [Vitis vinifera]    90   2e-16
ref|XP_003588509.1| hypothetical protein MTR_1g007990 [Medicago ...    87   1e-15
ref|XP_002874183.1| predicted protein [Arabidopsis lyrata subsp....    78   9e-13

>ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252197 [Vitis vinifera]
          Length = 1887

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/89 (47%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266  LRIISPVPEYCHAGSQLENIMFEVVDSEGAIDETIH-DMKFEIPHSLKITSEVSRIDDSL 90
            LR  S VP+ C AGSQLENI+FE+++S+G +DET+H + K    H+L I S+   +D S+
Sbjct: 1369 LRAASIVPQSCAAGSQLENIVFEIINSKGEVDETVHEEEKHGQFHTLTIMSDSFYLDGSV 1428

Query: 89   QYSFFHGRCTVPSIPFPPEEGNISFVAAH 3
            +++F +GRC +P+IP P ++G+ +F+AAH
Sbjct: 1429 RFAFRNGRCIIPTIPLPRKQGDFTFLAAH 1457


>emb|CBI23013.3| unnamed protein product [Vitis vinifera]
          Length = 1718

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/89 (47%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266  LRIISPVPEYCHAGSQLENIMFEVVDSEGAIDETIH-DMKFEIPHSLKITSEVSRIDDSL 90
            LR  S VP+ C AGSQLENI+FE+++S+G +DET+H + K    H+L I S+   +D S+
Sbjct: 1200 LRAASIVPQSCAAGSQLENIVFEIINSKGEVDETVHEEEKHGQFHTLTIMSDSFYLDGSV 1259

Query: 89   QYSFFHGRCTVPSIPFPPEEGNISFVAAH 3
            +++F +GRC +P+IP P ++G+ +F+AAH
Sbjct: 1260 RFAFRNGRCIIPTIPLPRKQGDFTFLAAH 1288


>emb|CAN73471.1| hypothetical protein VITISV_039356 [Vitis vinifera]
          Length = 1117

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/89 (47%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 LRIISPVPEYCHAGSQLENIMFEVVDSEGAIDETIH-DMKFEIPHSLKITSEVSRIDDSL 90
           LR  S VP+ C AGSQLENI+FE+++S+G +DET+H + K    H+L I S+   +D S+
Sbjct: 240 LRAASIVPQSCAAGSQLENIVFEIINSKGEVDETVHEEEKHGQFHTLTIMSDSFYLDGSV 299

Query: 89  QYSFFHGRCTVPSIPFPPEEGNISFVAAH 3
           +++F +GRC +P+IP P ++G+ +F+AAH
Sbjct: 300 RFAFRNGRCIIPTIPLPRKQGDFTFLAAH 328


>ref|XP_003588509.1| hypothetical protein MTR_1g007990 [Medicago truncatula]
           gi|355477557|gb|AES58760.1| hypothetical protein
           MTR_1g007990 [Medicago truncatula]
          Length = 1009

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 LRIISPVPEYCHAGSQLENIMFEVVDSEGAIDETIHDMKFEIP-HSLKITSEVSRIDDSL 90
           LRI S VP++C  G QLENI FE+V+++G +D  IH+   E   H L I S +S  D+S+
Sbjct: 495 LRIASEVPDFCATGGQLENIEFEIVNADGDVDMKIHNDDQECQFHMLTIKSGLSNADESI 554

Query: 89  QYSFFHGRCTVPSIPFPPEEGNISFVAAH 3
           +Y+F HGRCTVPSI  P  EG+  F A++
Sbjct: 555 RYTFKHGRCTVPSIRVPEIEGSFCFEASY 583


>ref|XP_002874183.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297320020|gb|EFH50442.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1607

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266  LRIISPVPEYCHAGSQLENIMFEVVDSEGAIDETIH-DMKFEIPHSLKITSEVSRIDDSL 90
            LR+++ +P+ C AGS L N++F+V DS+G++D  IH D K    H++ I S+ S ++ ++
Sbjct: 1097 LRLVTELPDCCAAGSNLVNLIFQVTDSDGSLDTRIHHDEKSGCFHTMCIESDSSIVESTI 1156

Query: 89   QYSFFHGRCTVPSIPFPPEEGNISFVAAH 3
            +Y+F HG C VPS+  P  EG  S+   H
Sbjct: 1157 RYAFVHGSCKVPSLSLPENEGVFSYRVFH 1185


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