BLASTX nr result

ID: Coptis25_contig00038429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038429
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511397.1| conserved hypothetical protein [Ricinus comm...   107   2e-21
emb|CBI15032.3| unnamed protein product [Vitis vinifera]              106   2e-21
emb|CAN67883.1| hypothetical protein VITISV_022357 [Vitis vinifera]   106   2e-21
ref|XP_002322165.1| predicted protein [Populus trichocarpa] gi|2...   105   6e-21
ref|XP_002282800.1| PREDICTED: probable inactive poly [ADP-ribos...   103   2e-20

>ref|XP_002511397.1| conserved hypothetical protein [Ricinus communis]
           gi|223550512|gb|EEF51999.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 374

 Score =  107 bits (266), Expect = 2e-21
 Identities = 59/123 (47%), Positives = 72/123 (58%)
 Frame = -3

Query: 559 HILPEYVISFKAPPSCFVGKQFNVNHMCLVNNGKRLDELNSDGFSNCKVLQEPTVKPKSP 380
           HI PE+VISFKAP                                 C + + P V P SP
Sbjct: 249 HIFPEFVISFKAP---------------------------------CCLKESPGV-PTSP 274

Query: 379 WMPFPTLISILSRFLPPIKISLIQKFHREYQEKKLSRQHLIQHVRQIAGDKLLISIIKEF 200
           WMPFP LIS LS FLPP  I L+ K H++++EKK+SRQ LIQ VRQIAGD+LLI++IK F
Sbjct: 275 WMPFPALISALSEFLPPATIGLLDKHHKDHREKKISRQELIQRVRQIAGDRLLIAVIKSF 334

Query: 199 RSK 191
           R+K
Sbjct: 335 RTK 337


>emb|CBI15032.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  106 bits (265), Expect = 2e-21
 Identities = 61/125 (48%), Positives = 75/125 (60%)
 Frame = -3

Query: 559 HILPEYVISFKAPPSCFVGKQFNVNHMCLVNNGKRLDELNSDGFSNCKVLQEPTVKPKSP 380
           HILPEYV++F+APP             CL             GF N    Q    KP SP
Sbjct: 213 HILPEYVVTFRAPP-------------CL------------KGFLNT---QGSLKKPTSP 244

Query: 379 WMPFPTLISILSRFLPPIKISLIQKFHREYQEKKLSRQHLIQHVRQIAGDKLLISIIKEF 200
           WMPF TLIS+LS+FLPP  ++LI K HR+++E K+ R  LI+ VRQIAGDKLL  +IK  
Sbjct: 245 WMPFTTLISVLSKFLPPQSVNLIAKHHRDHRENKIPRHELIRLVRQIAGDKLLTVVIKSH 304

Query: 199 RSKQL 185
           R+KQL
Sbjct: 305 RAKQL 309


>emb|CAN67883.1| hypothetical protein VITISV_022357 [Vitis vinifera]
          Length = 341

 Score =  106 bits (265), Expect = 2e-21
 Identities = 61/125 (48%), Positives = 75/125 (60%)
 Frame = -3

Query: 559 HILPEYVISFKAPPSCFVGKQFNVNHMCLVNNGKRLDELNSDGFSNCKVLQEPTVKPKSP 380
           HILPEYV++F+APP             CL             GF N    Q    KP SP
Sbjct: 210 HILPEYVVTFRAPP-------------CL------------KGFLNT---QGSLKKPTSP 241

Query: 379 WMPFPTLISILSRFLPPIKISLIQKFHREYQEKKLSRQHLIQHVRQIAGDKLLISIIKEF 200
           WMPF TLIS+LS+FLPP  ++LI K HR+++E K+ R  LI+ VRQIAGDKLL  +IK  
Sbjct: 242 WMPFTTLISVLSKFLPPQSVNLIAKHHRDHRENKIPRHELIRLVRQIAGDKLLTVVIKSH 301

Query: 199 RSKQL 185
           R+KQL
Sbjct: 302 RAKQL 306


>ref|XP_002322165.1| predicted protein [Populus trichocarpa] gi|222869161|gb|EEF06292.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  105 bits (261), Expect = 6e-21
 Identities = 59/123 (47%), Positives = 70/123 (56%)
 Frame = -3

Query: 559 HILPEYVISFKAPPSCFVGKQFNVNHMCLVNNGKRLDELNSDGFSNCKVLQEPTVKPKSP 380
           HILPEYVISF AP S   G                                  T+ P SP
Sbjct: 198 HILPEYVISFSAPSSLKGGSS--------------------------------TILPTSP 225

Query: 379 WMPFPTLISILSRFLPPIKISLIQKFHREYQEKKLSRQHLIQHVRQIAGDKLLISIIKEF 200
           WMPFP+LIS LS+FLPP    LI K++R ++ KK+SRQ LIQ VR+I GDKLLIS+IK F
Sbjct: 226 WMPFPSLISALSKFLPPTTTKLIIKYYRAHRAKKISRQELIQQVRKIVGDKLLISVIKSF 285

Query: 199 RSK 191
           R+K
Sbjct: 286 RTK 288


>ref|XP_002282800.1| PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO2
           [Vitis vinifera]
          Length = 310

 Score =  103 bits (256), Expect = 2e-20
 Identities = 59/123 (47%), Positives = 73/123 (59%)
 Frame = -3

Query: 559 HILPEYVISFKAPPSCFVGKQFNVNHMCLVNNGKRLDELNSDGFSNCKVLQEPTVKPKSP 380
           HILPEYV++F+APP             CL             GF N    Q    KP SP
Sbjct: 213 HILPEYVVTFRAPP-------------CL------------KGFLNT---QGSLKKPTSP 244

Query: 379 WMPFPTLISILSRFLPPIKISLIQKFHREYQEKKLSRQHLIQHVRQIAGDKLLISIIKEF 200
           WMPF TLIS+LS+FLPP  ++LI K HR+++E K+ R  LI+ VRQIAGDKLL  +IK  
Sbjct: 245 WMPFTTLISVLSKFLPPQSVNLIAKHHRDHRENKIPRHELIRLVRQIAGDKLLTVVIKSH 304

Query: 199 RSK 191
           R+K
Sbjct: 305 RAK 307


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