BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038422
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522329.1| Upstream activation factor subunit UAF30, pu...    83   3e-14
ref|XP_004148436.1| PREDICTED: upstream activation factor subuni...    75   7e-12
ref|XP_003632462.1| PREDICTED: upstream activation factor subuni...    74   1e-11
ref|XP_003517283.1| PREDICTED: upstream activation factor subuni...    74   1e-11
ref|XP_003517282.1| PREDICTED: upstream activation factor subuni...    74   1e-11

>ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
           communis] gi|223538407|gb|EEF40013.1| Upstream
           activation factor subunit UAF30, putative [Ricinus
           communis]
          Length = 322

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/73 (53%), Positives = 56/73 (76%)
 Frame = +1

Query: 1   VTDWEIMNRVGEFLGASDLNTTTTNVLRRKLEEDFGVDLSDKKSFIRDQLVLFILNKFQL 180
           V+D E++ R+ EFL  SDLNTTTT ++RR+LEEDFG+DLSDKK+FIR+Q+ LF+ ++F+ 
Sbjct: 2   VSDSELIERLREFLKNSDLNTTTTGIVRRQLEEDFGIDLSDKKAFIREQVDLFLQSQFEE 61

Query: 181 NEQQRLTSDMTDE 219
           N+Q        D+
Sbjct: 62  NDQNEEEEQEDDD 74


>ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
           sativus]
          Length = 332

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/64 (56%), Positives = 51/64 (79%)
 Frame = +1

Query: 1   VTDWEIMNRVGEFLGASDLNTTTTNVLRRKLEEDFGVDLSDKKSFIRDQLVLFILNKFQL 180
           V+D E+++R+ +FL  SDLNTTTT ++RRKLEEDFG+DLSDKK FIR+Q+ LF+  + + 
Sbjct: 2   VSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEK 61

Query: 181 NEQQ 192
             Q+
Sbjct: 62  AVQE 65


>ref|XP_003632462.1| PREDICTED: upstream activation factor subunit spp27-like [Vitis
           vinifera]
          Length = 296

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/63 (55%), Positives = 51/63 (80%)
 Frame = +1

Query: 1   VTDWEIMNRVGEFLGASDLNTTTTNVLRRKLEEDFGVDLSDKKSFIRDQLVLFILNKFQL 180
           V+D E++ R+ EFL +SDLNTTTT ++RRKLEEDFG+DLS KK+FIR+ + LF+ ++ + 
Sbjct: 2   VSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFLQSQLEK 61

Query: 181 NEQ 189
            E+
Sbjct: 62  AEE 64


>ref|XP_003517283.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2
           [Glycine max]
          Length = 331

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/73 (47%), Positives = 54/73 (73%)
 Frame = +1

Query: 1   VTDWEIMNRVGEFLGASDLNTTTTNVLRRKLEEDFGVDLSDKKSFIRDQLVLFILNKFQL 180
           V++ E++ R+ EFL +SDLNTTTT  +RR+LE DFG+DLSD+K+FIR+Q+ LF+  +   
Sbjct: 2   VSESELIGRLREFLRSSDLNTTTTATVRRQLEADFGIDLSDRKAFIREQVDLFLQTEHNQ 61

Query: 181 NEQQRLTSDMTDE 219
            +Q+   +D  +E
Sbjct: 62  PQQEERQNDDVEE 74


>ref|XP_003517282.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
           [Glycine max]
          Length = 337

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/73 (47%), Positives = 54/73 (73%)
 Frame = +1

Query: 1   VTDWEIMNRVGEFLGASDLNTTTTNVLRRKLEEDFGVDLSDKKSFIRDQLVLFILNKFQL 180
           V++ E++ R+ EFL +SDLNTTTT  +RR+LE DFG+DLSD+K+FIR+Q+ LF+  +   
Sbjct: 2   VSESELIGRLREFLRSSDLNTTTTATVRRQLEADFGIDLSDRKAFIREQVDLFLQTEHNQ 61

Query: 181 NEQQRLTSDMTDE 219
            +Q+   +D  +E
Sbjct: 62  PQQEERQNDDVEE 74