BLASTX nr result
ID: Coptis25_contig00038422
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038422 (219 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002522329.1| Upstream activation factor subunit UAF30, pu... 83 3e-14 ref|XP_004148436.1| PREDICTED: upstream activation factor subuni... 75 7e-12 ref|XP_003632462.1| PREDICTED: upstream activation factor subuni... 74 1e-11 ref|XP_003517283.1| PREDICTED: upstream activation factor subuni... 74 1e-11 ref|XP_003517282.1| PREDICTED: upstream activation factor subuni... 74 1e-11 >ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus communis] gi|223538407|gb|EEF40013.1| Upstream activation factor subunit UAF30, putative [Ricinus communis] Length = 322 Score = 82.8 bits (203), Expect = 3e-14 Identities = 39/73 (53%), Positives = 56/73 (76%) Frame = +1 Query: 1 VTDWEIMNRVGEFLGASDLNTTTTNVLRRKLEEDFGVDLSDKKSFIRDQLVLFILNKFQL 180 V+D E++ R+ EFL SDLNTTTT ++RR+LEEDFG+DLSDKK+FIR+Q+ LF+ ++F+ Sbjct: 2 VSDSELIERLREFLKNSDLNTTTTGIVRRQLEEDFGIDLSDKKAFIREQVDLFLQSQFEE 61 Query: 181 NEQQRLTSDMTDE 219 N+Q D+ Sbjct: 62 NDQNEEEEQEDDD 74 >ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis sativus] Length = 332 Score = 74.7 bits (182), Expect = 7e-12 Identities = 36/64 (56%), Positives = 51/64 (79%) Frame = +1 Query: 1 VTDWEIMNRVGEFLGASDLNTTTTNVLRRKLEEDFGVDLSDKKSFIRDQLVLFILNKFQL 180 V+D E+++R+ +FL SDLNTTTT ++RRKLEEDFG+DLSDKK FIR+Q+ LF+ + + Sbjct: 2 VSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEK 61 Query: 181 NEQQ 192 Q+ Sbjct: 62 AVQE 65 >ref|XP_003632462.1| PREDICTED: upstream activation factor subunit spp27-like [Vitis vinifera] Length = 296 Score = 73.9 bits (180), Expect = 1e-11 Identities = 35/63 (55%), Positives = 51/63 (80%) Frame = +1 Query: 1 VTDWEIMNRVGEFLGASDLNTTTTNVLRRKLEEDFGVDLSDKKSFIRDQLVLFILNKFQL 180 V+D E++ R+ EFL +SDLNTTTT ++RRKLEEDFG+DLS KK+FIR+ + LF+ ++ + Sbjct: 2 VSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFLQSQLEK 61 Query: 181 NEQ 189 E+ Sbjct: 62 AEE 64 >ref|XP_003517283.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2 [Glycine max] Length = 331 Score = 73.9 bits (180), Expect = 1e-11 Identities = 35/73 (47%), Positives = 54/73 (73%) Frame = +1 Query: 1 VTDWEIMNRVGEFLGASDLNTTTTNVLRRKLEEDFGVDLSDKKSFIRDQLVLFILNKFQL 180 V++ E++ R+ EFL +SDLNTTTT +RR+LE DFG+DLSD+K+FIR+Q+ LF+ + Sbjct: 2 VSESELIGRLREFLRSSDLNTTTTATVRRQLEADFGIDLSDRKAFIREQVDLFLQTEHNQ 61 Query: 181 NEQQRLTSDMTDE 219 +Q+ +D +E Sbjct: 62 PQQEERQNDDVEE 74 >ref|XP_003517282.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1 [Glycine max] Length = 337 Score = 73.9 bits (180), Expect = 1e-11 Identities = 35/73 (47%), Positives = 54/73 (73%) Frame = +1 Query: 1 VTDWEIMNRVGEFLGASDLNTTTTNVLRRKLEEDFGVDLSDKKSFIRDQLVLFILNKFQL 180 V++ E++ R+ EFL +SDLNTTTT +RR+LE DFG+DLSD+K+FIR+Q+ LF+ + Sbjct: 2 VSESELIGRLREFLRSSDLNTTTTATVRRQLEADFGIDLSDRKAFIREQVDLFLQTEHNQ 61 Query: 181 NEQQRLTSDMTDE 219 +Q+ +D +E Sbjct: 62 PQQEERQNDDVEE 74