BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038417
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]   102   4e-20
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   102   4e-20
emb|CAN83807.1| hypothetical protein VITISV_026962 [Vitis vinifera]   101   6e-20
emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]   101   6e-20
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   101   7e-20

>emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]
          Length = 1905

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/103 (47%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301  LSTLSCLGFDTKIVHLVQQCISSPHFSLIINGTPFGHFKSSRGLRQGDPLSPILFILCME 122
            L  +S +GF  + ++ ++ C S+  FS++ING+P G F+SSRGLRQGDPLSP LF+L ME
Sbjct: 1286 LEVMSKMGFGHRWINWIKWCCSTASFSILINGSPSGFFRSSRGLRQGDPLSPYLFLLAME 1345

Query: 121  ILSRILTKKINENKLHGIQI---SRNSFAISHLLFADDAFIFC 2
             LS++L++  N N + G ++         +SHLLFADD  IFC
Sbjct: 1346 ALSQLLSRARNGNFISGFKVGGRGSEGLVVSHLLFADDTLIFC 1388


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/94 (47%), Positives = 66/94 (70%)
 Frame = -1

Query: 283  LGFDTKIVHLVQQCISSPHFSLIINGTPFGHFKSSRGLRQGDPLSPILFILCMEILSRIL 104
            LGF  + V  +  C++S  + ++ING+P+G    SRG+RQGDPLSP LF+ C E+LS +L
Sbjct: 958  LGFAPRWVKWIMTCVTSVSYEVLINGSPYGKIFPSRGIRQGDPLSPYLFLFCAEVLSNML 1017

Query: 103  TKKINENKLHGIQISRNSFAISHLLFADDAFIFC 2
             K     ++HG++I+++  AISHLLFADD+  FC
Sbjct: 1018 RKAEVNKQIHGMKITKDCLAISHLLFADDSLFFC 1051


>emb|CAN83807.1| hypothetical protein VITISV_026962 [Vitis vinifera]
          Length = 806

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/103 (49%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 LSTLSCLGFDTKIVHLVQQCISSPHFSLIINGTPFGHFKSSRGLRQGDPLSPILFILCME 122
           L  L  +GF TK V+ ++ CISS  FS+++NG+P G F+SSRGLRQGDPLSP LFI+ ME
Sbjct: 322 LVILDKMGFGTKWVNWMRWCISSIRFSILLNGSPXGFFQSSRGLRQGDPLSPFLFIIAME 381

Query: 121 ILSRILTKKINENKLHGIQISR---NSFAISHLLFADDAFIFC 2
           +LS IL + +    L G            +SHLLF DD  +FC
Sbjct: 382 VLSSILKRALQGGYLEGFMAGERGGEGVVVSHLLFVDDTLVFC 424


>emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]
          Length = 1971

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301  LSTLSCLGFDTKIVHLVQQCISSPHFSLIINGTPFGHFKSSRGLRQGDPLSPILFILCME 122
            L  L  +GF  K +  +  CIS+  FS++INGTP G+F SSRGLRQGDPLSP LF+L ME
Sbjct: 900  LFVLQSMGFGEKWIGWISWCISTATFSVLINGTPEGYFNSSRGLRQGDPLSPYLFVLGME 959

Query: 121  ILSRILTKKINENKLHGIQIS---RNSFAISHLLFADDAFIFC 2
             LSR++ + +    L G +++    N   +SHLLFADD  +FC
Sbjct: 960  ALSRLIHRAVGGGFLSGCRVNGRGGNGALVSHLLFADDTLVFC 1002


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score =  101 bits (251), Expect = 7e-20
 Identities = 44/97 (45%), Positives = 63/97 (64%)
 Frame = -1

Query: 292 LSCLGFDTKIVHLVQQCISSPHFSLIINGTPFGHFKSSRGLRQGDPLSPILFILCMEILS 113
           ++ LGF+ K +  +  C++S  +S++ING P+GH   +RG+RQGDPLSP LF+LC E L 
Sbjct: 592 MTALGFNNKWISWIMNCVTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALI 651

Query: 112 RILTKKINENKLHGIQISRNSFAISHLLFADDAFIFC 2
            IL K     K+ GIQ      +++HLLFADD  + C
Sbjct: 652 HILNKAEQAGKITGIQFQDKKVSVNHLLFADDTLLMC 688