BLASTX nr result
ID: Coptis25_contig00038406
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038406 (258 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_007353796.1| cytochrome b6 (chloroplast) [Chrysanthemum x... 172 3e-41 ref|YP_086995.1| cytochrome b6 [Panax ginseng] gi|114107162|ref|... 172 3e-41 ref|YP_004465217.1| cytochrome b6 [Jacobaea vulgaris] gi|4528490... 172 3e-41 gb|ADD31080.1| cytochrome b6 protein [Lonicera japonica] 172 3e-41 ref|YP_001936547.1| cytochrome b6 [Fagopyrum esculentum subsp. a... 172 3e-41 >ref|YP_007353796.1| cytochrome b6 (chloroplast) [Chrysanthemum x morifolium] gi|375298866|gb|AFA45305.1| cytochrome b6 (chloroplast) [Chrysanthemum x morifolium] Length = 215 Score = 172 bits (436), Expect = 3e-41 Identities = 84/84 (100%), Positives = 84/84 (100%) Frame = -2 Query: 254 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 75 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR Sbjct: 44 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 103 Query: 74 VYLTGGFKKPRELTWVTGVVLAVL 3 VYLTGGFKKPRELTWVTGVVLAVL Sbjct: 104 VYLTGGFKKPRELTWVTGVVLAVL 127 >ref|YP_086995.1| cytochrome b6 [Panax ginseng] gi|114107162|ref|YP_740147.1| cytochrome b6 [Daucus carota] gi|359422174|ref|YP_004935582.1| cytochrome b6 (chloroplast) [Eleutherococcus senticosus] gi|61212554|sp|Q68RX7.1|CYB6_PANGI RecName: Full=Cytochrome b6 gi|122233829|sp|Q0G9T2.1|CYB6_DAUCA RecName: Full=Cytochrome b6 gi|51235342|gb|AAT98538.1| cytochrome b6 [Panax ginseng] gi|113200937|gb|ABI32453.1| cytochrome b6 [Daucus carota] gi|156573681|gb|ABU85173.1| cytochrome b6 [Anethum graveolens] gi|156598620|gb|ABU85566.1| cytochrome b6 [Scaevola aemula] gi|347448237|gb|AEO92649.1| cytochrome b6 (chloroplast) [Eleutherococcus senticosus] Length = 215 Score = 172 bits (436), Expect = 3e-41 Identities = 84/84 (100%), Positives = 84/84 (100%) Frame = -2 Query: 254 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 75 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR Sbjct: 44 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 103 Query: 74 VYLTGGFKKPRELTWVTGVVLAVL 3 VYLTGGFKKPRELTWVTGVVLAVL Sbjct: 104 VYLTGGFKKPRELTWVTGVVLAVL 127 >ref|YP_004465217.1| cytochrome b6 [Jacobaea vulgaris] gi|452849081|ref|YP_007474759.1| cytochrome b6 (chloroplast) [Chrysanthemum indicum] gi|308156112|gb|ADO15440.1| cytochrome b6 [Jacobaea vulgaris] gi|372863236|gb|AEX99308.1| cytochrome b6 (chloroplast) [Chrysanthemum indicum] gi|372863475|gb|AEX99544.1| cytochrome b6 (chloroplast) [Chrysanthemum indicum] Length = 215 Score = 172 bits (436), Expect = 3e-41 Identities = 84/84 (100%), Positives = 84/84 (100%) Frame = -2 Query: 254 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 75 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR Sbjct: 44 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 103 Query: 74 VYLTGGFKKPRELTWVTGVVLAVL 3 VYLTGGFKKPRELTWVTGVVLAVL Sbjct: 104 VYLTGGFKKPRELTWVTGVVLAVL 127 >gb|ADD31080.1| cytochrome b6 protein [Lonicera japonica] Length = 215 Score = 172 bits (436), Expect = 3e-41 Identities = 84/84 (100%), Positives = 84/84 (100%) Frame = -2 Query: 254 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 75 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR Sbjct: 44 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 103 Query: 74 VYLTGGFKKPRELTWVTGVVLAVL 3 VYLTGGFKKPRELTWVTGVVLAVL Sbjct: 104 VYLTGGFKKPRELTWVTGVVLAVL 127 >ref|YP_001936547.1| cytochrome b6 [Fagopyrum esculentum subsp. ancestrale] gi|166065387|gb|ABY79762.1| cytochrome b6 [Fagopyrum esculentum subsp. ancestrale] Length = 215 Score = 172 bits (436), Expect = 3e-41 Identities = 84/84 (100%), Positives = 84/84 (100%) Frame = -2 Query: 254 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 75 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR Sbjct: 44 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 103 Query: 74 VYLTGGFKKPRELTWVTGVVLAVL 3 VYLTGGFKKPRELTWVTGVVLAVL Sbjct: 104 VYLTGGFKKPRELTWVTGVVLAVL 127