BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038406
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007353796.1| cytochrome b6 (chloroplast) [Chrysanthemum x...   172   3e-41
ref|YP_086995.1| cytochrome b6 [Panax ginseng] gi|114107162|ref|...   172   3e-41
ref|YP_004465217.1| cytochrome b6 [Jacobaea vulgaris] gi|4528490...   172   3e-41
gb|ADD31080.1| cytochrome b6 protein [Lonicera japonica]              172   3e-41
ref|YP_001936547.1| cytochrome b6 [Fagopyrum esculentum subsp. a...   172   3e-41

>ref|YP_007353796.1| cytochrome b6 (chloroplast) [Chrysanthemum x morifolium]
           gi|375298866|gb|AFA45305.1| cytochrome b6 (chloroplast)
           [Chrysanthemum x morifolium]
          Length = 215

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = -2

Query: 254 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 75
           FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR
Sbjct: 44  FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 103

Query: 74  VYLTGGFKKPRELTWVTGVVLAVL 3
           VYLTGGFKKPRELTWVTGVVLAVL
Sbjct: 104 VYLTGGFKKPRELTWVTGVVLAVL 127


>ref|YP_086995.1| cytochrome b6 [Panax ginseng] gi|114107162|ref|YP_740147.1|
           cytochrome b6 [Daucus carota]
           gi|359422174|ref|YP_004935582.1| cytochrome b6
           (chloroplast) [Eleutherococcus senticosus]
           gi|61212554|sp|Q68RX7.1|CYB6_PANGI RecName:
           Full=Cytochrome b6 gi|122233829|sp|Q0G9T2.1|CYB6_DAUCA
           RecName: Full=Cytochrome b6 gi|51235342|gb|AAT98538.1|
           cytochrome b6 [Panax ginseng]
           gi|113200937|gb|ABI32453.1| cytochrome b6 [Daucus
           carota] gi|156573681|gb|ABU85173.1| cytochrome b6
           [Anethum graveolens] gi|156598620|gb|ABU85566.1|
           cytochrome b6 [Scaevola aemula]
           gi|347448237|gb|AEO92649.1| cytochrome b6 (chloroplast)
           [Eleutherococcus senticosus]
          Length = 215

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = -2

Query: 254 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 75
           FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR
Sbjct: 44  FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 103

Query: 74  VYLTGGFKKPRELTWVTGVVLAVL 3
           VYLTGGFKKPRELTWVTGVVLAVL
Sbjct: 104 VYLTGGFKKPRELTWVTGVVLAVL 127


>ref|YP_004465217.1| cytochrome b6 [Jacobaea vulgaris] gi|452849081|ref|YP_007474759.1|
           cytochrome b6 (chloroplast) [Chrysanthemum indicum]
           gi|308156112|gb|ADO15440.1| cytochrome b6 [Jacobaea
           vulgaris] gi|372863236|gb|AEX99308.1| cytochrome b6
           (chloroplast) [Chrysanthemum indicum]
           gi|372863475|gb|AEX99544.1| cytochrome b6 (chloroplast)
           [Chrysanthemum indicum]
          Length = 215

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = -2

Query: 254 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 75
           FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR
Sbjct: 44  FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 103

Query: 74  VYLTGGFKKPRELTWVTGVVLAVL 3
           VYLTGGFKKPRELTWVTGVVLAVL
Sbjct: 104 VYLTGGFKKPRELTWVTGVVLAVL 127


>gb|ADD31080.1| cytochrome b6 protein [Lonicera japonica]
          Length = 215

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = -2

Query: 254 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 75
           FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR
Sbjct: 44  FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 103

Query: 74  VYLTGGFKKPRELTWVTGVVLAVL 3
           VYLTGGFKKPRELTWVTGVVLAVL
Sbjct: 104 VYLTGGFKKPRELTWVTGVVLAVL 127


>ref|YP_001936547.1| cytochrome b6 [Fagopyrum esculentum subsp. ancestrale]
           gi|166065387|gb|ABY79762.1| cytochrome b6 [Fagopyrum
           esculentum subsp. ancestrale]
          Length = 215

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = -2

Query: 254 FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 75
           FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR
Sbjct: 44  FLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR 103

Query: 74  VYLTGGFKKPRELTWVTGVVLAVL 3
           VYLTGGFKKPRELTWVTGVVLAVL
Sbjct: 104 VYLTGGFKKPRELTWVTGVVLAVL 127