BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038397
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852...   285   7e-75
ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|2...   280   2e-73
emb|CBI17494.3| unnamed protein product [Vitis vinifera]              278   8e-73
ref|XP_002521561.1| replication factor C / DNA polymerase III ga...   271   8e-71
ref|XP_003516562.1| PREDICTED: uncharacterized protein LOC100817...   240   1e-61

>ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852980 [Vitis vinifera]
          Length = 766

 Score =  285 bits (728), Expect = 7e-75
 Identities = 137/209 (65%), Positives = 166/209 (79%), Gaps = 1/209 (0%)
 Frame = -3

Query: 625  ENRPMQGVAQVTLSPHHFELNLKSSKNARCALMSLVKEITGNA-IAPDVSTASFRTEYKV 449
            E RPMQ V  +T S HH ELN+     AR ALM++VK+I  N  I P+VS   F+ +YKV
Sbjct: 486  EKRPMQVVVPLTSSAHHVELNVNLEPYARHALMAIVKQIRSNCEITPEVSNVDFKADYKV 545

Query: 448  LVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDSVKNRCEVVKVDAPVTHE 269
            LVLYEVDK  EN+Q++IKWIMDCY D+C+LI+CCEDDVD+L+SVKNRC+V+K++APVTHE
Sbjct: 546  LVLYEVDKAAENIQYLIKWIMDCYTDACQLIMCCEDDVDVLESVKNRCKVIKLEAPVTHE 605

Query: 268  IMEVLIQIARQENIDLPMSFAAKIATKSKQNLRQAIMALEACKAHNYPFVDEQPIPFAWX 89
            IMEVLIQIAR+E+ DLPMSFAAKIATKSKQ+LR+AIMALEACKAHNYPF+D+QPIP  W 
Sbjct: 606  IMEVLIQIARKEDFDLPMSFAAKIATKSKQDLRKAIMALEACKAHNYPFLDDQPIPLGWE 665

Query: 88   XXXXXXXXXXXADPSQNRSFHVRGKLQKL 2
                        DPS NR F++RGK+QKL
Sbjct: 666  EVLVELAAEVLVDPSPNRLFYLRGKIQKL 694


>ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|222853150|gb|EEE90697.1|
            predicted protein [Populus trichocarpa]
          Length = 924

 Score =  280 bits (715), Expect = 2e-73
 Identities = 139/218 (63%), Positives = 165/218 (75%), Gaps = 1/218 (0%)
 Frame = -3

Query: 652  HELRHFQVKENRPMQGVAQVTLSPHHFELNLKSSKNARCALMSLVKEITGN-AIAPDVST 476
            H+LR+FQ ++    Q V  +T S HH E+N+    NA+ ALM LVKEI    AI PD S 
Sbjct: 624  HDLRYFQ-EQRGAAQVVVPITSSAHHAEINVNLEPNAKTALMGLVKEIRNTYAITPDFSN 682

Query: 475  ASFRTEYKVLVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDSVKNRCEVV 296
             +F+ +YKVLVLYEVDK  EN+Q ++KWIMDCY D+CKLILCCEDD DIL++VKNRC+V+
Sbjct: 683  VNFKPDYKVLVLYEVDKAPENIQPLMKWIMDCYTDACKLILCCEDDSDILETVKNRCKVL 742

Query: 295  KVDAPVTHEIMEVLIQIARQENIDLPMSFAAKIATKSKQNLRQAIMALEACKAHNYPFVD 116
            KVDAPVTHEIMEVLIQIAR+E  DLPM+FAAKIA KSKQNLR+AIMALEACKAHNYPF D
Sbjct: 743  KVDAPVTHEIMEVLIQIARKEEFDLPMNFAAKIAAKSKQNLRKAIMALEACKAHNYPFSD 802

Query: 115  EQPIPFAWXXXXXXXXXXXXADPSQNRSFHVRGKLQKL 2
            +QPIPF W             DPS N+ F  RGKL++L
Sbjct: 803  DQPIPFGWEEVLVELATEILIDPSPNKLFSARGKLKRL 840


>emb|CBI17494.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  278 bits (710), Expect = 8e-73
 Identities = 138/218 (63%), Positives = 167/218 (76%), Gaps = 1/218 (0%)
 Frame = -3

Query: 652  HELRHFQVKENRPMQGVAQVTLSPHHFELNLKSSKNARCALMSLVKEITGNA-IAPDVST 476
            HELR F V+E RPMQ V  +T S HH ELN+     AR ALM++VK+I  N  I P+  +
Sbjct: 422  HELRSFHVQEKRPMQVVVPLTSSAHHVELNVNLEPYARHALMAIVKQIRSNCEITPEHGS 481

Query: 475  ASFRTEYKVLVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDSVKNRCEVV 296
                    VLVLYEVDK  EN+Q++IKWIMDCY D+C+LI+CCEDDVD+L+SVKNRC+V+
Sbjct: 482  ILL---ISVLVLYEVDKAAENIQYLIKWIMDCYTDACQLIMCCEDDVDVLESVKNRCKVI 538

Query: 295  KVDAPVTHEIMEVLIQIARQENIDLPMSFAAKIATKSKQNLRQAIMALEACKAHNYPFVD 116
            K++APVTHEIMEVLIQIAR+E+ DLPMSFAAKIATKSKQ+LR+AIMALEACKAHNYPF+D
Sbjct: 539  KLEAPVTHEIMEVLIQIARKEDFDLPMSFAAKIATKSKQDLRKAIMALEACKAHNYPFLD 598

Query: 115  EQPIPFAWXXXXXXXXXXXXADPSQNRSFHVRGKLQKL 2
            +QPIP  W             DPS NR F++RGK+QKL
Sbjct: 599  DQPIPLGWEEVLVELAAEVLVDPSPNRLFYLRGKIQKL 636


>ref|XP_002521561.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223539239|gb|EEF40832.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 779

 Score =  271 bits (693), Expect = 8e-71
 Identities = 132/209 (63%), Positives = 159/209 (76%), Gaps = 1/209 (0%)
 Frame = -3

Query: 625  ENRPMQGVAQVTLSPHHFELNLKSSKNARCALMSLVKEITGN-AIAPDVSTASFRTEYKV 449
            E R MQ    +  S HH ELN+    NA+ ALMSLV+EI+ N A+AP+VS A+F+ +YKV
Sbjct: 496  EERAMQVAVPIASSAHHLELNVNLEPNAKHALMSLVREISNNYALAPEVSNATFKPDYKV 555

Query: 448  LVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDSVKNRCEVVKVDAPVTHE 269
            LVLY+VDK  E++QH+IKWIMDCY D+CKLILCCEDD DIL+ V NRC V+KVD+PVTHE
Sbjct: 556  LVLYQVDKAAEDIQHLIKWIMDCYTDACKLILCCEDDADILEPVTNRCRVIKVDSPVTHE 615

Query: 268  IMEVLIQIARQENIDLPMSFAAKIATKSKQNLRQAIMALEACKAHNYPFVDEQPIPFAWX 89
            IMEVLIQIAR+E  +LPM+FAA+IA KSKQ+LR+AIM LEACK HNYPF D+QPIP +W 
Sbjct: 616  IMEVLIQIARKEEFELPMNFAARIAAKSKQHLRKAIMTLEACKEHNYPFADDQPIPSSWE 675

Query: 88   XXXXXXXXXXXADPSQNRSFHVRGKLQKL 2
                       +DPS  R F VRGK QKL
Sbjct: 676  EVLIELAAEILSDPSPKRLFMVRGKFQKL 704


>ref|XP_003516562.1| PREDICTED: uncharacterized protein LOC100817775 [Glycine max]
          Length = 718

 Score =  240 bits (613), Expect = 1e-61
 Identities = 118/199 (59%), Positives = 150/199 (75%), Gaps = 1/199 (0%)
 Frame = -3

Query: 595  VTLSPHHFELNLKSSKNARCALMSLVKEITG-NAIAPDVSTASFRTEYKVLVLYEVDKVE 419
            +T S HH EL++ S  NA+ ALM L+KEI+   A+AP+VS  +F++++KV+VLY+V K  
Sbjct: 448  ITSSSHHMELDVNSESNAKYALMGLIKEISNIYAVAPEVSNINFKSDFKVIVLYDVHKAV 507

Query: 418  ENVQHMIKWIMDCYMDSCKLILCCEDDVDILDSVKNRCEVVKVDAPVTHEIMEVLIQIAR 239
            +N++H+IKWI+D Y D CKL+LCCEDD DI++ VKNR +V++VDAP  HEI+EVLIQIA+
Sbjct: 508  DNIRHIIKWIIDRYSDICKLVLCCEDDADIIEHVKNRFKVIQVDAPQNHEIIEVLIQIAK 567

Query: 238  QENIDLPMSFAAKIATKSKQNLRQAIMALEACKAHNYPFVDEQPIPFAWXXXXXXXXXXX 59
             E IDL M+FAAKIATKSKQNLR+AIMALEACKAHNYPF  EQPIP  W           
Sbjct: 568  NEEIDLSMNFAAKIATKSKQNLRKAIMALEACKAHNYPFSAEQPIPVGWEEIVIEVAAEI 627

Query: 58   XADPSQNRSFHVRGKLQKL 2
             ADPS +R   +RGK Q L
Sbjct: 628  LADPSFSRLLSIRGKFQML 646