BLASTX nr result
ID: Coptis25_contig00038397
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038397 (654 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852... 285 7e-75 ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|2... 280 2e-73 emb|CBI17494.3| unnamed protein product [Vitis vinifera] 278 8e-73 ref|XP_002521561.1| replication factor C / DNA polymerase III ga... 271 8e-71 ref|XP_003516562.1| PREDICTED: uncharacterized protein LOC100817... 240 1e-61 >ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852980 [Vitis vinifera] Length = 766 Score = 285 bits (728), Expect = 7e-75 Identities = 137/209 (65%), Positives = 166/209 (79%), Gaps = 1/209 (0%) Frame = -3 Query: 625 ENRPMQGVAQVTLSPHHFELNLKSSKNARCALMSLVKEITGNA-IAPDVSTASFRTEYKV 449 E RPMQ V +T S HH ELN+ AR ALM++VK+I N I P+VS F+ +YKV Sbjct: 486 EKRPMQVVVPLTSSAHHVELNVNLEPYARHALMAIVKQIRSNCEITPEVSNVDFKADYKV 545 Query: 448 LVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDSVKNRCEVVKVDAPVTHE 269 LVLYEVDK EN+Q++IKWIMDCY D+C+LI+CCEDDVD+L+SVKNRC+V+K++APVTHE Sbjct: 546 LVLYEVDKAAENIQYLIKWIMDCYTDACQLIMCCEDDVDVLESVKNRCKVIKLEAPVTHE 605 Query: 268 IMEVLIQIARQENIDLPMSFAAKIATKSKQNLRQAIMALEACKAHNYPFVDEQPIPFAWX 89 IMEVLIQIAR+E+ DLPMSFAAKIATKSKQ+LR+AIMALEACKAHNYPF+D+QPIP W Sbjct: 606 IMEVLIQIARKEDFDLPMSFAAKIATKSKQDLRKAIMALEACKAHNYPFLDDQPIPLGWE 665 Query: 88 XXXXXXXXXXXADPSQNRSFHVRGKLQKL 2 DPS NR F++RGK+QKL Sbjct: 666 EVLVELAAEVLVDPSPNRLFYLRGKIQKL 694 >ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|222853150|gb|EEE90697.1| predicted protein [Populus trichocarpa] Length = 924 Score = 280 bits (715), Expect = 2e-73 Identities = 139/218 (63%), Positives = 165/218 (75%), Gaps = 1/218 (0%) Frame = -3 Query: 652 HELRHFQVKENRPMQGVAQVTLSPHHFELNLKSSKNARCALMSLVKEITGN-AIAPDVST 476 H+LR+FQ ++ Q V +T S HH E+N+ NA+ ALM LVKEI AI PD S Sbjct: 624 HDLRYFQ-EQRGAAQVVVPITSSAHHAEINVNLEPNAKTALMGLVKEIRNTYAITPDFSN 682 Query: 475 ASFRTEYKVLVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDSVKNRCEVV 296 +F+ +YKVLVLYEVDK EN+Q ++KWIMDCY D+CKLILCCEDD DIL++VKNRC+V+ Sbjct: 683 VNFKPDYKVLVLYEVDKAPENIQPLMKWIMDCYTDACKLILCCEDDSDILETVKNRCKVL 742 Query: 295 KVDAPVTHEIMEVLIQIARQENIDLPMSFAAKIATKSKQNLRQAIMALEACKAHNYPFVD 116 KVDAPVTHEIMEVLIQIAR+E DLPM+FAAKIA KSKQNLR+AIMALEACKAHNYPF D Sbjct: 743 KVDAPVTHEIMEVLIQIARKEEFDLPMNFAAKIAAKSKQNLRKAIMALEACKAHNYPFSD 802 Query: 115 EQPIPFAWXXXXXXXXXXXXADPSQNRSFHVRGKLQKL 2 +QPIPF W DPS N+ F RGKL++L Sbjct: 803 DQPIPFGWEEVLVELATEILIDPSPNKLFSARGKLKRL 840 >emb|CBI17494.3| unnamed protein product [Vitis vinifera] Length = 708 Score = 278 bits (710), Expect = 8e-73 Identities = 138/218 (63%), Positives = 167/218 (76%), Gaps = 1/218 (0%) Frame = -3 Query: 652 HELRHFQVKENRPMQGVAQVTLSPHHFELNLKSSKNARCALMSLVKEITGNA-IAPDVST 476 HELR F V+E RPMQ V +T S HH ELN+ AR ALM++VK+I N I P+ + Sbjct: 422 HELRSFHVQEKRPMQVVVPLTSSAHHVELNVNLEPYARHALMAIVKQIRSNCEITPEHGS 481 Query: 475 ASFRTEYKVLVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDSVKNRCEVV 296 VLVLYEVDK EN+Q++IKWIMDCY D+C+LI+CCEDDVD+L+SVKNRC+V+ Sbjct: 482 ILL---ISVLVLYEVDKAAENIQYLIKWIMDCYTDACQLIMCCEDDVDVLESVKNRCKVI 538 Query: 295 KVDAPVTHEIMEVLIQIARQENIDLPMSFAAKIATKSKQNLRQAIMALEACKAHNYPFVD 116 K++APVTHEIMEVLIQIAR+E+ DLPMSFAAKIATKSKQ+LR+AIMALEACKAHNYPF+D Sbjct: 539 KLEAPVTHEIMEVLIQIARKEDFDLPMSFAAKIATKSKQDLRKAIMALEACKAHNYPFLD 598 Query: 115 EQPIPFAWXXXXXXXXXXXXADPSQNRSFHVRGKLQKL 2 +QPIP W DPS NR F++RGK+QKL Sbjct: 599 DQPIPLGWEEVLVELAAEVLVDPSPNRLFYLRGKIQKL 636 >ref|XP_002521561.1| replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] gi|223539239|gb|EEF40832.1| replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] Length = 779 Score = 271 bits (693), Expect = 8e-71 Identities = 132/209 (63%), Positives = 159/209 (76%), Gaps = 1/209 (0%) Frame = -3 Query: 625 ENRPMQGVAQVTLSPHHFELNLKSSKNARCALMSLVKEITGN-AIAPDVSTASFRTEYKV 449 E R MQ + S HH ELN+ NA+ ALMSLV+EI+ N A+AP+VS A+F+ +YKV Sbjct: 496 EERAMQVAVPIASSAHHLELNVNLEPNAKHALMSLVREISNNYALAPEVSNATFKPDYKV 555 Query: 448 LVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDSVKNRCEVVKVDAPVTHE 269 LVLY+VDK E++QH+IKWIMDCY D+CKLILCCEDD DIL+ V NRC V+KVD+PVTHE Sbjct: 556 LVLYQVDKAAEDIQHLIKWIMDCYTDACKLILCCEDDADILEPVTNRCRVIKVDSPVTHE 615 Query: 268 IMEVLIQIARQENIDLPMSFAAKIATKSKQNLRQAIMALEACKAHNYPFVDEQPIPFAWX 89 IMEVLIQIAR+E +LPM+FAA+IA KSKQ+LR+AIM LEACK HNYPF D+QPIP +W Sbjct: 616 IMEVLIQIARKEEFELPMNFAARIAAKSKQHLRKAIMTLEACKEHNYPFADDQPIPSSWE 675 Query: 88 XXXXXXXXXXXADPSQNRSFHVRGKLQKL 2 +DPS R F VRGK QKL Sbjct: 676 EVLIELAAEILSDPSPKRLFMVRGKFQKL 704 >ref|XP_003516562.1| PREDICTED: uncharacterized protein LOC100817775 [Glycine max] Length = 718 Score = 240 bits (613), Expect = 1e-61 Identities = 118/199 (59%), Positives = 150/199 (75%), Gaps = 1/199 (0%) Frame = -3 Query: 595 VTLSPHHFELNLKSSKNARCALMSLVKEITG-NAIAPDVSTASFRTEYKVLVLYEVDKVE 419 +T S HH EL++ S NA+ ALM L+KEI+ A+AP+VS +F++++KV+VLY+V K Sbjct: 448 ITSSSHHMELDVNSESNAKYALMGLIKEISNIYAVAPEVSNINFKSDFKVIVLYDVHKAV 507 Query: 418 ENVQHMIKWIMDCYMDSCKLILCCEDDVDILDSVKNRCEVVKVDAPVTHEIMEVLIQIAR 239 +N++H+IKWI+D Y D CKL+LCCEDD DI++ VKNR +V++VDAP HEI+EVLIQIA+ Sbjct: 508 DNIRHIIKWIIDRYSDICKLVLCCEDDADIIEHVKNRFKVIQVDAPQNHEIIEVLIQIAK 567 Query: 238 QENIDLPMSFAAKIATKSKQNLRQAIMALEACKAHNYPFVDEQPIPFAWXXXXXXXXXXX 59 E IDL M+FAAKIATKSKQNLR+AIMALEACKAHNYPF EQPIP W Sbjct: 568 NEEIDLSMNFAAKIATKSKQNLRKAIMALEACKAHNYPFSAEQPIPVGWEEIVIEVAAEI 627 Query: 58 XADPSQNRSFHVRGKLQKL 2 ADPS +R +RGK Q L Sbjct: 628 LADPSFSRLLSIRGKFQML 646