BLASTX nr result
ID: Coptis25_contig00038393
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038393 (471 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004157442.1| PREDICTED: uncharacterized protein LOC101226... 83 3e-14 ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-... 83 3e-14 ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata ... 80 1e-13 ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]... 77 2e-12 ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 >ref|XP_004157442.1| PREDICTED: uncharacterized protein LOC101226733 [Cucumis sativus] Length = 140 Score = 82.8 bits (203), Expect = 3e-14 Identities = 42/78 (53%), Positives = 50/78 (64%) Frame = +2 Query: 2 GASGAVNAILLLDIFLFPTKVIYLWLVIPVPAFLVGAFIIGTDLKRMTEKDSRVSXXXXX 181 GASGAVNAI+LLDIFLFP +YL IPVPA L+G F+IG D+ RM E DS++S Sbjct: 63 GASGAVNAIMLLDIFLFPKATLYLQFFIPVPAILLGIFLIGKDMLRMLENDSQISGSAHL 122 Query: 182 XXXXXXXXXXXRIRRGRF 235 R+RRGRF Sbjct: 123 GGAAVAALAWARVRRGRF 140 >ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-like [Cucumis sativus] Length = 336 Score = 82.8 bits (203), Expect = 3e-14 Identities = 42/78 (53%), Positives = 50/78 (64%) Frame = +2 Query: 2 GASGAVNAILLLDIFLFPTKVIYLWLVIPVPAFLVGAFIIGTDLKRMTEKDSRVSXXXXX 181 GASGAVNAI+LLDIFLFP +YL IPVPA L+G F+IG D+ RM E DS++S Sbjct: 259 GASGAVNAIMLLDIFLFPKATLYLQFFIPVPAILLGIFLIGKDMLRMLENDSQISGSAHL 318 Query: 182 XXXXXXXXXXXRIRRGRF 235 R+RRGRF Sbjct: 319 GGAAVAALAWARVRRGRF 336 >ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata] gi|297336130|gb|EFH66547.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata] Length = 336 Score = 80.5 bits (197), Expect = 1e-13 Identities = 41/78 (52%), Positives = 51/78 (65%) Frame = +2 Query: 2 GASGAVNAILLLDIFLFPTKVIYLWLVIPVPAFLVGAFIIGTDLKRMTEKDSRVSXXXXX 181 GASGAVNAI+LLDIFL PT +YL +IPVPA L+G F+IG D+ R+TE +S +S Sbjct: 257 GASGAVNAIMLLDIFLHPTATLYLEFIIPVPAMLLGIFLIGKDILRITEGNSNISGSAHL 316 Query: 182 XXXXXXXXXXXRIRRGRF 235 RIR+GRF Sbjct: 317 GGAAVAAIAWARIRKGRF 334 >ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana] gi|9795596|gb|AAF98414.1|AC026238_6 Hypothetical protein [Arabidopsis thaliana] gi|13877607|gb|AAK43881.1|AF370504_1 Unknown protein [Arabidopsis thaliana] gi|20148713|gb|AAM10247.1| unknown protein [Arabidopsis thaliana] gi|21592397|gb|AAM64348.1| unknown [Arabidopsis thaliana] gi|332191612|gb|AEE29733.1| RHOMBOID-like protein 12 [Arabidopsis thaliana] Length = 336 Score = 76.6 bits (187), Expect = 2e-12 Identities = 40/78 (51%), Positives = 49/78 (62%) Frame = +2 Query: 2 GASGAVNAILLLDIFLFPTKVIYLWLVIPVPAFLVGAFIIGTDLKRMTEKDSRVSXXXXX 181 GASGAVNAI+LLDIFL P +YL IPVPA L+G F+IG D+ R+TE +S +S Sbjct: 257 GASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIFLIGKDILRITEGNSNISGSAHL 316 Query: 182 XXXXXXXXXXXRIRRGRF 235 RIR+GRF Sbjct: 317 GGAAVAAIAWARIRKGRF 334 >ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|222855471|gb|EEE93018.1| predicted protein [Populus trichocarpa] Length = 242 Score = 73.9 bits (180), Expect = 1e-11 Identities = 39/78 (50%), Positives = 48/78 (61%) Frame = +2 Query: 2 GASGAVNAILLLDIFLFPTKVIYLWLVIPVPAFLVGAFIIGTDLKRMTEKDSRVSXXXXX 181 GASGAVNAI+LLDIFL P +Y +IPVPA L+G F+IG DL R+ E +S +S Sbjct: 165 GASGAVNAIMLLDIFLNPRATLYFDFIIPVPAILLGIFLIGKDLLRVMEGNSNISGSAHL 224 Query: 182 XXXXXXXXXXXRIRRGRF 235 RI+RGRF Sbjct: 225 GGAAVAAIAWARIKRGRF 242