BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038381
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   102   4e-20
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   102   4e-20
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   102   4e-20
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/136 (39%), Positives = 81/136 (59%)
 Frame = +3

Query: 30  DLVNFVNNILRLHNGMISKFEVNEFVEKECPYVDEWILVLQRKNVKHLVLKFNEYRSPVY 209
           +LVN ++N+L LHNG I KF+++         +D WIL L R + K  VL+   ++   Y
Sbjct: 68  NLVNIIDNVLLLHNGPIYKFKLSHRDLLGVSDIDRWILHLSRGSTKEFVLEI--WKGQRY 125

Query: 210 DVPTCLFSCQTLCKLKLQGCILNLPTQYKGFRNLTDLELVFVTITNQSFENLVAKIPLLR 389
            +P+CLFS + L  L+L  C+L  P  +KGFRNL  L+L  VT+  + FENL++   LL 
Sbjct: 126 KLPSCLFSFENLTHLELFNCLLKPPPAFKGFRNLKSLDLQHVTLAQEVFENLISSCALLE 185

Query: 390 RLSIWNCESLTCFNIS 437
           RL++ N +  T   I+
Sbjct: 186 RLTLMNFDGFTHLKIN 201


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score =  102 bits (253), Expect = 4e-20
 Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 12/156 (7%)
 Frame = +3

Query: 3   NLVFDPQFID------------LVNFVNNILRLHNGMISKFEVNEFVEKECPYVDEWILV 146
           NLVFD Q I             L   ++++L LH+G I KF+++         +D W L 
Sbjct: 58  NLVFDSQCISDTSEDLLVIKSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLH 117

Query: 147 LQRKNVKHLVLKFNEYRSPVYDVPTCLFSCQTLCKLKLQGCILNLPTQYKGFRNLTDLEL 326
           L R+ VK  VL+   ++   Y +P+CLFSCQ L  L+L  C L  P+ ++GFRNL  L+L
Sbjct: 118 LTRRPVKEFVLEI--WKGQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDL 175

Query: 327 VFVTITNQSFENLVAKIPLLRRLSIWNCESLTCFNI 434
             VT++  +FENL++  PLL RL++ N +     NI
Sbjct: 176 QHVTLSQDAFENLISTCPLLERLTLMNFDGFNYLNI 211


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score =  102 bits (253), Expect = 4e-20
 Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 12/156 (7%)
 Frame = +3

Query: 3   NLVFDPQFID------------LVNFVNNILRLHNGMISKFEVNEFVEKECPYVDEWILV 146
           NLVFD Q I             L   ++++L LH+G I KF+++         +D W L 
Sbjct: 290 NLVFDSQCISDTSEDLLVIKSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLH 349

Query: 147 LQRKNVKHLVLKFNEYRSPVYDVPTCLFSCQTLCKLKLQGCILNLPTQYKGFRNLTDLEL 326
           L R+ VK  VL+   ++   Y +P+CLFSCQ L  L+L  C L  P+ ++GFRNL  L+L
Sbjct: 350 LTRRPVKEFVLEI--WKGQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDL 407

Query: 327 VFVTITNQSFENLVAKIPLLRRLSIWNCESLTCFNI 434
             VT++  +FENL++  PLL RL++ N +     NI
Sbjct: 408 QHVTLSQDAFENLISTCPLLERLTLMNFDGFNYLNI 443


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/135 (39%), Positives = 81/135 (60%)
 Frame = +3

Query: 33  LVNFVNNILRLHNGMISKFEVNEFVEKECPYVDEWILVLQRKNVKHLVLKFNEYRSPVYD 212
           LVN ++++L LHNG I KF+++         +D WIL L R ++K  +L+   ++   Y 
Sbjct: 79  LVNIIDHVLLLHNGPIQKFKLSHRDLLGVSDIDRWILHLSRSSIKEFILEI--WKGQRYK 136

Query: 213 VPTCLFSCQTLCKLKLQGCILNLPTQYKGFRNLTDLELVFVTITNQSFENLVAKIPLLRR 392
           VP+ LFS + L  L+L  C+L  P  +KGFR+L  L+L  +T+T   FENL+   PLL R
Sbjct: 137 VPSSLFSFEHLIHLELFNCLLQPPLTFKGFRSLKSLDLQHITLTQNVFENLIFSCPLLER 196

Query: 393 LSIWNCESLTCFNIS 437
           L++ N +  T  NI+
Sbjct: 197 LTLMNFDGFTHLNIN 211


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 12/157 (7%)
 Frame = +3

Query: 3   NLVFDPQFID------------LVNFVNNILRLHNGMISKFEVNEFVEKECPYVDEWILV 146
           ++VFD Q I             LVN +++IL LHNG I KF+++         +D WIL 
Sbjct: 136 HIVFDSQGISISSQDQTTIKNKLVNIIDHILLLHNGPIYKFKLSHCDLLAVSDIDRWILH 195

Query: 147 LQRKNVKHLVLKFNEYRSPVYDVPTCLFSCQTLCKLKLQGCILNLPTQYKGFRNLTDLEL 326
           L R + K  VL+   ++   Y +P+CLFS + L  L+L  C+L  P  +KGFRNL +L+L
Sbjct: 196 LSRGSTKEFVLEI--WKGQQYKLPSCLFSFKNLVYLELFNCLLKPPLAFKGFRNLKNLDL 253

Query: 327 VFVTITNQSFENLVAKIPLLRRLSIWNCESLTCFNIS 437
             VT+  + FE L++   +L RL++ N +  T  NI+
Sbjct: 254 QHVTLAQEVFEKLISSCAMLERLTLINFDGFTHLNIN 290