BLASTX nr result

ID: Coptis25_contig00038378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038378
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35900.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_003571837.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   140   1e-31
gb|EEE51075.1| hypothetical protein OsJ_31772 [Oryza sativa Japo...   136   2e-30
gb|EEC67090.1| hypothetical protein OsI_33882 [Oryza sativa Indi...   136   2e-30
gb|ABG66112.1| expressed protein [Oryza sativa Japonica Group]        136   2e-30

>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/92 (71%), Positives = 80/92 (86%)
 Frame = -3

Query: 276  SKDHGTVIWTRSMQRLYFLVERCYKLREPVLLVGETGGGKTTVCQLLSTDLKRNLNILNC 97
            S+  G +IWT+SM+RLYFLVERCY+LREP+LLVGETGGGKTT+CQLLS  L   L+ILNC
Sbjct: 1161 SESLGDIIWTKSMRRLYFLVERCYRLREPILLVGETGGGKTTICQLLSAVLGLKLHILNC 1220

Query: 96   HQFTDTSDFLGGFYPVRDRSVLSLEFKHIVEQ 1
            HQ+T+TSDFLGGFYP+R+RS L  EFK ++EQ
Sbjct: 1221 HQYTETSDFLGGFYPIRERSRLISEFKFLIEQ 1252



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/66 (48%), Positives = 40/66 (60%)
 Frame = -3

Query: 246 RSMQRLYFLVERCYKLREPVLLVGETGGGKTTVCQLLSTDLKRNLNILNCHQFTDTSDFL 67
           RS   L   +    K  EPVLLVGETG GKTT+ Q L+  L + L +LN  Q +D +D L
Sbjct: 614 RSSLHLLERIACSVKCNEPVLLVGETGTGKTTLVQTLAMRLGQKLTVLNLSQQSDVADLL 673

Query: 66  GGFYPV 49
           GGF P+
Sbjct: 674 GGFKPM 679


>ref|XP_003571837.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Brachypodium
            distachyon]
          Length = 5125

 Score =  140 bits (352), Expect = 1e-31
 Identities = 61/91 (67%), Positives = 78/91 (85%)
 Frame = -3

Query: 279  LSKDHGTVIWTRSMQRLYFLVERCYKLREPVLLVGETGGGKTTVCQLLSTDLKRNLNILN 100
            + +  G + WT+SM RLYFL+ERCY+ REPVLLVGETGGGKTTVCQ+LS  L   L+ILN
Sbjct: 1180 VQESFGNITWTKSMWRLYFLIERCYRSREPVLLVGETGGGKTTVCQVLSAVLGVKLHILN 1239

Query: 99   CHQFTDTSDFLGGFYPVRDRSVLSLEFKHIV 7
            CHQ+T+TSDF+GGF+P+RDRS ++LEFKH++
Sbjct: 1240 CHQYTETSDFVGGFFPIRDRSKIALEFKHLI 1270



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
 Frame = -3

Query: 204 KLREPVLLVGETGGGKTTVCQLLSTDLKRNLNILNCHQFTDTSDFLGGFYPVRDRSV--- 34
           K  EPVLLVGETG GKTT+ Q L++ LKR L ++N  Q +D SD LGGF P    S+   
Sbjct: 508 KFNEPVLLVGETGTGKTTLVQNLASWLKRPLTVVNLSQQSDISDLLGGFKPTDAHSICLP 567

Query: 33  LSLEFKHI 10
           L  EF+ I
Sbjct: 568 LYTEFRDI 575


>gb|EEE51075.1| hypothetical protein OsJ_31772 [Oryza sativa Japonica Group]
          Length = 5128

 Score =  136 bits (343), Expect = 2e-30
 Identities = 60/86 (69%), Positives = 74/86 (86%)
 Frame = -3

Query: 264  GTVIWTRSMQRLYFLVERCYKLREPVLLVGETGGGKTTVCQLLSTDLKRNLNILNCHQFT 85
            G + WT SM RLYFL+ERCY+ REPVLLVGETGGGKTTVCQ+LS  L   L+ILNCHQ+T
Sbjct: 1166 GNITWTESMWRLYFLIERCYRSREPVLLVGETGGGKTTVCQVLSAVLGVKLHILNCHQYT 1225

Query: 84   DTSDFLGGFYPVRDRSVLSLEFKHIV 7
            +TSDF+GGF P+RDRS +++EFKH++
Sbjct: 1226 ETSDFIGGFCPIRDRSKIAMEFKHLI 1251


>gb|EEC67090.1| hypothetical protein OsI_33882 [Oryza sativa Indica Group]
          Length = 5024

 Score =  136 bits (343), Expect = 2e-30
 Identities = 60/86 (69%), Positives = 74/86 (86%)
 Frame = -3

Query: 264  GTVIWTRSMQRLYFLVERCYKLREPVLLVGETGGGKTTVCQLLSTDLKRNLNILNCHQFT 85
            G + WT SM RLYFL+ERCY+ REPVLLVGETGGGKTTVCQ+LS  L   L+ILNCHQ+T
Sbjct: 1248 GNITWTESMWRLYFLIERCYRSREPVLLVGETGGGKTTVCQVLSAVLGVKLHILNCHQYT 1307

Query: 84   DTSDFLGGFYPVRDRSVLSLEFKHIV 7
            +TSDF+GGF P+RDRS +++EFKH++
Sbjct: 1308 ETSDFIGGFCPIRDRSKIAMEFKHLI 1333



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
 Frame = -3

Query: 204 KLREPVLLVGETGGGKTTVCQLLSTDLKRNLNILNCHQFTDTSDFLGGFYPVRDRSV--- 34
           K  EPVLLVGETG GKTT+ Q L++ LK+ L ++N  Q +D SD LGGF P   RS+   
Sbjct: 558 KFNEPVLLVGETGTGKTTLVQNLASWLKQPLTVVNLSQQSDISDLLGGFKPADARSICFP 617

Query: 33  LSLEFKHI 10
           L +EFK +
Sbjct: 618 LYIEFKDL 625


>gb|ABG66112.1| expressed protein [Oryza sativa Japonica Group]
          Length = 5157

 Score =  136 bits (343), Expect = 2e-30
 Identities = 60/86 (69%), Positives = 74/86 (86%)
 Frame = -3

Query: 264  GTVIWTRSMQRLYFLVERCYKLREPVLLVGETGGGKTTVCQLLSTDLKRNLNILNCHQFT 85
            G + WT SM RLYFL+ERCY+ REPVLLVGETGGGKTTVCQ+LS  L   L+ILNCHQ+T
Sbjct: 1205 GNITWTESMWRLYFLIERCYRSREPVLLVGETGGGKTTVCQVLSAVLGVKLHILNCHQYT 1264

Query: 84   DTSDFLGGFYPVRDRSVLSLEFKHIV 7
            +TSDF+GGF P+RDRS +++EFKH++
Sbjct: 1265 ETSDFIGGFCPIRDRSKIAMEFKHLI 1290



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
 Frame = -3

Query: 204 KLREPVLLVGETGGGKTTVCQLLSTDLKRNLNILNCHQFTDTSDFLGGFYPVRDRSV--- 34
           K  EPVLLVGETG GKTT+ Q L++ LK+ L ++N  Q +D SD LGGF P   RS+   
Sbjct: 515 KFNEPVLLVGETGTGKTTLVQNLASWLKQPLTVVNLSQQSDISDLLGGFKPADARSICFP 574

Query: 33  LSLEFKHI 10
           L +EFK +
Sbjct: 575 LYIEFKDL 582


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