BLASTX nr result
ID: Coptis25_contig00038374
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038374 (253 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein o... 177 1e-42 ref|XP_004164941.1| PREDICTED: chlorophyll a-b binding protein 4... 177 1e-42 ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 4... 177 1e-42 ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ... 177 1e-42 ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein o... 177 1e-42 >ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like [Cucumis sativus] Length = 265 Score = 177 bits (448), Expect = 1e-42 Identities = 82/83 (98%), Positives = 83/83 (100%) Frame = -1 Query: 250 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 71 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL Sbjct: 58 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117 Query: 70 LSRNGVKFGEAVWFKAGSQIFSD 2 LSRNGVKFGEAVWFKAGSQIFS+ Sbjct: 118 LSRNGVKFGEAVWFKAGSQIFSE 140 >ref|XP_004164941.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like, partial [Cucumis sativus] Length = 149 Score = 177 bits (448), Expect = 1e-42 Identities = 82/83 (98%), Positives = 83/83 (100%) Frame = -1 Query: 250 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 71 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL Sbjct: 58 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117 Query: 70 LSRNGVKFGEAVWFKAGSQIFSD 2 LSRNGVKFGEAVWFKAGSQIFS+ Sbjct: 118 LSRNGVKFGEAVWFKAGSQIFSE 140 >ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like [Cucumis sativus] Length = 265 Score = 177 bits (448), Expect = 1e-42 Identities = 82/83 (98%), Positives = 83/83 (100%) Frame = -1 Query: 250 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 71 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL Sbjct: 58 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117 Query: 70 LSRNGVKFGEAVWFKAGSQIFSD 2 LSRNGVKFGEAVWFKAGSQIFS+ Sbjct: 118 LSRNGVKFGEAVWFKAGSQIFSE 140 >ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like [Cucumis sativus] gi|449525484|ref|XP_004169747.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like [Cucumis sativus] Length = 267 Score = 177 bits (448), Expect = 1e-42 Identities = 82/83 (98%), Positives = 83/83 (100%) Frame = -1 Query: 250 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 71 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL Sbjct: 60 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 119 Query: 70 LSRNGVKFGEAVWFKAGSQIFSD 2 LSRNGVKFGEAVWFKAGSQIFS+ Sbjct: 120 LSRNGVKFGEAVWFKAGSQIFSE 142 >ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like [Cucumis sativus] Length = 265 Score = 177 bits (448), Expect = 1e-42 Identities = 82/83 (98%), Positives = 83/83 (100%) Frame = -1 Query: 250 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 71 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL Sbjct: 58 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117 Query: 70 LSRNGVKFGEAVWFKAGSQIFSD 2 LSRNGVKFGEAVWFKAGSQIFS+ Sbjct: 118 LSRNGVKFGEAVWFKAGSQIFSE 140