BLASTX nr result

ID: Coptis25_contig00038366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038366
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19060.3| unnamed protein product [Vitis vinifera]               80   3e-13
ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254...    80   3e-13
emb|CAN68379.1| hypothetical protein VITISV_018905 [Vitis vinifera]    80   3e-13
ref|NP_565956.1| camphor resistance CrcB-like protein [Arabidops...    72   5e-11
ref|XP_002879949.1| camphor resistance CrcB family protein [Arab...    71   9e-11

>emb|CBI19060.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 37/47 (78%), Positives = 39/47 (82%)
 Frame = -2

Query: 538 STFIAEFHAMRESKHPWRAYLYASITILPSFILGTFIYSVPVWTKAY 398
           STFIAEF+AMRES HPWRAY YA +TI  SF LGT IYSVPVWTK Y
Sbjct: 481 STFIAEFNAMRESHHPWRAYAYAMLTIFLSFGLGTLIYSVPVWTKGY 527


>ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254107 [Vitis vinifera]
          Length = 510

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 37/47 (78%), Positives = 39/47 (82%)
 Frame = -2

Query: 538 STFIAEFHAMRESKHPWRAYLYASITILPSFILGTFIYSVPVWTKAY 398
           STFIAEF+AMRES HPWRAY YA +TI  SF LGT IYSVPVWTK Y
Sbjct: 463 STFIAEFNAMRESHHPWRAYAYAMLTIFLSFGLGTLIYSVPVWTKGY 509


>emb|CAN68379.1| hypothetical protein VITISV_018905 [Vitis vinifera]
          Length = 399

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 37/47 (78%), Positives = 39/47 (82%)
 Frame = -2

Query: 538 STFIAEFHAMRESKHPWRAYLYASITILPSFILGTFIYSVPVWTKAY 398
           STFIAEF+AMRES HPWRAY YA +TI  SF LGT IYSVPVWTK Y
Sbjct: 352 STFIAEFNAMRESHHPWRAYAYAMLTIFLSFGLGTLIYSVPVWTKGY 398


>ref|NP_565956.1| camphor resistance CrcB-like protein [Arabidopsis thaliana]
           gi|238479528|ref|NP_001154568.1| camphor resistance
           CrcB-like protein [Arabidopsis thaliana]
           gi|20196897|gb|AAM14827.1| Expressed protein
           [Arabidopsis thaliana] gi|26453266|dbj|BAC43706.1|
           unknown protein [Arabidopsis thaliana]
           gi|330254925|gb|AEC10019.1| camphor resistance CrcB-like
           protein [Arabidopsis thaliana]
           gi|330254926|gb|AEC10020.1| camphor resistance CrcB-like
           protein [Arabidopsis thaliana]
          Length = 461

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = -2

Query: 538 STFIAEFHAMRESKHPWRAYLYASITILPSFILGTFIYSVPVW 410
           STF+AEF+AMRES +PWRAY YAS TI+ SF +GT IYSVPVW
Sbjct: 414 STFMAEFNAMRESDYPWRAYAYASFTIVVSFAIGTIIYSVPVW 456


>ref|XP_002879949.1| camphor resistance CrcB family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325788|gb|EFH56208.1| camphor resistance
           CrcB family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 462

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 32/47 (68%), Positives = 37/47 (78%)
 Frame = -2

Query: 538 STFIAEFHAMRESKHPWRAYLYASITILPSFILGTFIYSVPVWTKAY 398
           STF+AEF+AMRES +PWRAY YAS TI  SF +GT IYSVPVW   +
Sbjct: 415 STFMAEFNAMRESDYPWRAYAYASFTIAVSFAIGTVIYSVPVWVVGF 461


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