BLASTX nr result

ID: Coptis25_contig00038350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038350
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABL63483.1| argonaute 2 [Pisum sativum]                            131   6e-29
ref|NP_175274.1| protein argonaute [Arabidopsis thaliana] gi|113...   126   2e-27
ref|XP_002526275.1| eukaryotic translation initiation factor 2c,...   126   2e-27
ref|XP_003534084.1| PREDICTED: protein argonaute 1-like [Glycine...   125   3e-27
ref|XP_002318338.1| argonaute protein group [Populus trichocarpa...   125   3e-27

>gb|ABL63483.1| argonaute 2 [Pisum sativum]
          Length = 1070

 Score =  131 bits (329), Expect = 6e-29
 Identities = 78/177 (44%), Positives = 108/177 (61%), Gaps = 17/177 (9%)
 Frame = -3

Query: 481 IYQYHVEITPATTVKKLNRLVMRNLEEAYKQSDIGNILLAYDGQKCIYTAKLLPFISKVF 302
           ++QY V ITP  T + +NR VM  L + Y+ S +G  L AYDG+K +YTA  LPFISK F
Sbjct: 256 LHQYDVTITPEVTSRGVNRAVMAQLVKLYRDSHLGKRLPAYDGRKSLYTAGPLPFISKDF 315

Query: 301 NVVVPNE-----RGV--SREFQVTIHWVCDIDL--VG------ENKKSLVAIRALDIVLS 167
            + + +E     RG    REF+V I +    DL  +G      +      A++ LDIVL 
Sbjct: 316 RITLVDEDDDGSRGKRRDREFKVVIKFASRADLHHLGLFLEGRQTDAPQEALQGLDIVLR 375

Query: 166 QTPNARYIPVKRSFFSDVFIAN--IGEGLQAWRWFFQSVRPIQNGLSVNVDVSSAVF 2
           + P +RY PV RSF+S +      +GEGL++WR F+QS+RP QNGLS+N+D+SS  F
Sbjct: 376 ELPTSRYCPVGRSFYSPLLGIRQPLGEGLESWRGFYQSIRPTQNGLSLNIDMSSTAF 432


>ref|NP_175274.1| protein argonaute [Arabidopsis thaliana]
           gi|11386626|sp|O04379.1|AGO1_ARATH RecName: Full=Protein
           argonaute 1 gi|5733867|gb|AAD49755.1|AC007932_3
           Identical to Argonaute protein from Arabidopsis thaliana
           gb|U91995. EST gb|AA720232 comes from this gene
           [Arabidopsis thaliana] gi|2149640|gb|AAC18440.1|
           Argonaute protein [Arabidopsis thaliana]
           gi|24030354|gb|AAN41341.1| putative leaf development
           protein Argonaute [Arabidopsis thaliana]
           gi|332194166|gb|AEE32287.1| protein argonaute
           [Arabidopsis thaliana]
          Length = 1048

 Score =  126 bits (317), Expect = 2e-27
 Identities = 78/176 (44%), Positives = 110/176 (62%), Gaps = 16/176 (9%)
 Frame = -3

Query: 481 IYQYHVEITPATTVKKLNRLVMRNLEEAYKQSDIGNILLAYDGQKCIYTAKLLPFISKVF 302
           ++ Y V ITP  T + +NR VM+ L + Y+ S +G+ L AYDG+K +YTA  LPF SK F
Sbjct: 208 LHHYDVTITPEVTSRGVNRAVMKQLVDNYRDSHLGSRLPAYDGRKSLYTAGPLPFNSKEF 267

Query: 301 NV-VVPNERGV-----SREFQVTIHWVCDIDL--VG---ENKKS---LVAIRALDIVLSQ 164
            + ++  E G       REF+V I  V   DL  +G   E K+S     A++ LDIVL +
Sbjct: 268 RINLLDEEVGAGGQRREREFKVVIKLVARADLHHLGMFLEGKQSDAPQEALQVLDIVLRE 327

Query: 163 TPNARYIPVKRSFFSDVF--IANIGEGLQAWRWFFQSVRPIQNGLSVNVDVSSAVF 2
            P +RYIPV RSF+S       ++G+GL++WR F+QS+RP Q GLS+N+D+SS  F
Sbjct: 328 LPTSRYIPVGRSFYSPDIGKKQSLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAF 383


>ref|XP_002526275.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223534406|gb|EEF36112.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 1063

 Score =  126 bits (316), Expect = 2e-27
 Identities = 76/176 (43%), Positives = 104/176 (59%), Gaps = 16/176 (9%)
 Frame = -3

Query: 481 IYQYHVEITPATTVKKLNRLVMRNLEEAYKQSDIGNILLAYDGQKCIYTAKLLPFISKVF 302
           ++QY V ITP  T + +NR VM  L + Y++S +G  L AYDG+K +YTA  LPFISK F
Sbjct: 219 LHQYDVTITPEVTSRGVNRAVMEQLVKLYRESHLGKRLPAYDGRKSLYTAGPLPFISKEF 278

Query: 301 NVVVPNERGVS------REFQVTIHWVCDIDL--VG------ENKKSLVAIRALDIVLSQ 164
            + + +E   S      REF+V I      DL  +G      +      A++ LDIVL +
Sbjct: 279 KITLIDEDDGSGGQRREREFRVVIKLAARADLHHLGLFLQGRQADAPQEALQVLDIVLRE 338

Query: 163 TPNARYIPVKRSFFSDVFIAN--IGEGLQAWRWFFQSVRPIQNGLSVNVDVSSAVF 2
            P  RY PV RSF+S        +GEGL++WR F+QS+RP Q GLS+N+D+SS  F
Sbjct: 339 LPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAF 394


>ref|XP_003534084.1| PREDICTED: protein argonaute 1-like [Glycine max]
          Length = 1058

 Score =  125 bits (315), Expect = 3e-27
 Identities = 74/176 (42%), Positives = 104/176 (59%), Gaps = 16/176 (9%)
 Frame = -3

Query: 481 IYQYHVEITPATTVKKLNRLVMRNLEEAYKQSDIGNILLAYDGQKCIYTAKLLPFISKVF 302
           ++QY V ITP  T + +NR VM  L   Y++S +G  L AYDG+K +YTA  LPF+SK F
Sbjct: 213 LHQYDVTITPEVTSRGVNRAVMEQLVRLYRESHLGKRLPAYDGRKSLYTAGPLPFMSKEF 272

Query: 301 NVVVPNE------RGVSREFQVTIHWVCDIDL--VG------ENKKSLVAIRALDIVLSQ 164
            +V+ ++      +   REF+V I      DL  +G      +      A++ LDIVL +
Sbjct: 273 RIVLADDDEGAGGQRRDREFKVVIKLAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRE 332

Query: 163 TPNARYIPVKRSFFSDVFIAN--IGEGLQAWRWFFQSVRPIQNGLSVNVDVSSAVF 2
            P  RY PV RSF+S        +GEGL++WR F+QS+RP Q GLS+N+D+SS  F
Sbjct: 333 LPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAF 388


>ref|XP_002318338.1| argonaute protein group [Populus trichocarpa]
           gi|222859011|gb|EEE96558.1| argonaute protein group
           [Populus trichocarpa]
          Length = 1062

 Score =  125 bits (315), Expect = 3e-27
 Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 16/176 (9%)
 Frame = -3

Query: 481 IYQYHVEITPATTVKKLNRLVMRNLEEAYKQSDIGNILLAYDGQKCIYTAKLLPFISKVF 302
           ++QY V ITP  T + +NR VM  L + Y++S +G  L AYDG+K +YTA  LPF +K F
Sbjct: 219 LHQYDVTITPEVTSRGVNRAVMEQLVKLYRESHLGKRLPAYDGRKSLYTAGALPFQAKDF 278

Query: 301 NVVVPNERGVS------REFQVTIHWVCDIDL--VG------ENKKSLVAIRALDIVLSQ 164
            + + ++   S      REF+VTI      DL  +G      +      A++ LDIVL +
Sbjct: 279 KITLIDDDDGSGGPRREREFKVTIKLAARADLHHLGLFLRGQQADAPQEALQVLDIVLRE 338

Query: 163 TPNARYIPVKRSFFSDVF--IANIGEGLQAWRWFFQSVRPIQNGLSVNVDVSSAVF 2
            P ARY PV RSF+S       ++GEGL++WR F+QS+RP Q GLS+N+D+SS  F
Sbjct: 339 LPTARYCPVGRSFYSPDLGRRQSLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAF 394


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