BLASTX nr result

ID: Coptis25_contig00038343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038343
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267983.1| PREDICTED: uncharacterized protein LOC100248...   130   1e-28
ref|XP_002321884.1| predicted protein [Populus trichocarpa] gi|2...   121   8e-26
ref|XP_002275855.1| PREDICTED: uncharacterized protein LOC100265...   110   1e-22
gb|AFW65012.1| hypothetical protein ZEAMMB73_488948 [Zea mays]        107   9e-22
ref|XP_002510861.1| molybdopterin cofactor sulfurase, putative [...   107   1e-21

>ref|XP_002267983.1| PREDICTED: uncharacterized protein LOC100248586 [Vitis vinifera]
          Length = 654

 Score =  130 bits (327), Expect = 1e-28
 Identities = 83/181 (45%), Positives = 113/181 (62%), Gaps = 2/181 (1%)
 Frame = -3

Query: 537 SIGIASLVPVKRTYPLLGXXXXXXXDTQQKAEFGEQEDVLPITSSYSGPISAQVEIRDDK 358
           S GI +LVP K+ + L         + +Q ++F  QE+ L  +SS+SGP+S Q      K
Sbjct: 362 STGIVNLVPAKKLFWLPADSSGTDTEPEQTSKFEFQEE-LHTSSSFSGPLSIQ------K 414

Query: 357 CLSSTERHNEESEHGETSELRETEPCTEQMNYLTSEIVEV--PSDSVKLETTQINTAEAD 184
            LS       E E GETSEL +TE   +     TS+++E+  P+D V+ + T++   E  
Sbjct: 415 TLSG----RFEYEQGETSELPKTEGTAKHDRPETSKVIEMEKPADFVQ-QNTKVRGKEG- 468

Query: 183 RKVSIECRGLDHADSLGLINISTRARCQINWVVNALSKLQHPHTEKGLPLVQIYGPKIKF 4
             + IECRGLDH DSLGL+ IS RAR  INW+VNAL+KL HP+TE+G PLV+IYGP IKF
Sbjct: 469 --LEIECRGLDHVDSLGLVLISRRARYLINWLVNALTKLHHPNTEEGSPLVRIYGPNIKF 526

Query: 3   D 1
           +
Sbjct: 527 E 527


>ref|XP_002321884.1| predicted protein [Populus trichocarpa] gi|222868880|gb|EEF06011.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score =  121 bits (303), Expect = 8e-26
 Identities = 74/179 (41%), Positives = 102/179 (56%)
 Frame = -3

Query: 537 SIGIASLVPVKRTYPLLGXXXXXXXDTQQKAEFGEQEDVLPITSSYSGPISAQVEIRDDK 358
           S G+ SLVP  + + L+        D +  ++ G QED L  ++S+SGPIS+Q       
Sbjct: 360 SAGMVSLVPANKMFRLVDEFSGTDSDFEHLSKLGLQEDELDSSNSFSGPISSQT------ 413

Query: 357 CLSSTERHNEESEHGETSELRETEPCTEQMNYLTSEIVEVPSDSVKLETTQINTAEADRK 178
                  H+   E GETSE + T    +Q    TS+IVE    +  +        + +  
Sbjct: 414 ------MHSGRVEQGETSESQTTGTTAKQKVSKTSDIVESGKSAEVMR-------QENGI 460

Query: 177 VSIECRGLDHADSLGLINISTRARCQINWVVNALSKLQHPHTEKGLPLVQIYGPKIKFD 1
           + IECRGLD  DSLGL  IS RARC INW+VNAL KL+HP+T + +PLV+IYGP++KFD
Sbjct: 461 LEIECRGLDQVDSLGLTRISNRARCLINWMVNALLKLKHPNTGE-IPLVRIYGPRVKFD 518


>ref|XP_002275855.1| PREDICTED: uncharacterized protein LOC100265017 [Vitis vinifera]
          Length = 652

 Score =  110 bits (275), Expect = 1e-22
 Identities = 72/181 (39%), Positives = 96/181 (53%)
 Frame = -3

Query: 543 ARSIGIASLVPVKRTYPLLGXXXXXXXDTQQKAEFGEQEDVLPITSSYSGPISAQVEIRD 364
           A S+GI SL+P  R             +T+Q ++    +  LP  SS SGP+  Q     
Sbjct: 363 AVSVGIVSLLPATRRSQFPDESATTDIETEQTSKLKLHKGELPAASSLSGPLPVQ----- 417

Query: 363 DKCLSSTERHNEESEHGETSELRETEPCTEQMNYLTSEIVEVPSDSVKLETTQINTAEAD 184
                  +  NE  E  E S++       +Q    +SEIVE+    + +  +    +  +
Sbjct: 418 -------KISNETFESYEISDVN-----FKQKGSSSSEIVELEMP-LDIPQSLNKDSSVN 464

Query: 183 RKVSIECRGLDHADSLGLINISTRARCQINWVVNALSKLQHPHTEKGLPLVQIYGPKIKF 4
               IECRGLDHADSLGLI IS RAR  INW+VNAL  L+HPH+E GLPLV+IYGP + F
Sbjct: 465 GYSQIECRGLDHADSLGLILISLRARFLINWLVNALMSLRHPHSENGLPLVRIYGPNVAF 524

Query: 3   D 1
           D
Sbjct: 525 D 525


>gb|AFW65012.1| hypothetical protein ZEAMMB73_488948 [Zea mays]
          Length = 683

 Score =  107 bits (268), Expect = 9e-22
 Identities = 70/189 (37%), Positives = 102/189 (53%), Gaps = 7/189 (3%)
 Frame = -3

Query: 546 MARSIGIASLVPVKR--TYPLLGXXXXXXXDTQQKAEFGEQEDVLPITSSYSGPISAQVE 373
           +ARSIGI S+VP +R   +              + A+    +  +  TSS+SGP+S+   
Sbjct: 373 IARSIGIVSIVPARRWSLHDGYSTELEHSRSFPKLADPALDDGDVETTSSFSGPLSSTAV 432

Query: 372 IRDDKCLSSTERHNEESEHGETSELRETEPCTEQMNYLTSEIVEVPSDSVKLETTQINTA 193
            R  + L S    N +++     E+RE +  T +  + T E    P      ET Q+   
Sbjct: 433 TRS-RTLQSDAAENGDAD---APEIREVD-ITPENGFYTGE----PRAENGHETEQLAKE 483

Query: 192 EADRK-----VSIECRGLDHADSLGLINISTRARCQINWVVNALSKLQHPHTEKGLPLVQ 28
           E DR+     + +ECRGLDHAD+LGLI I  R RC  NW++ AL KL+HPH + G  LV+
Sbjct: 484 EEDRQGGESVMEVECRGLDHADALGLIAIGNRLRCITNWLLVALQKLRHPHADNGHQLVK 543

Query: 27  IYGPKIKFD 1
           +YGP++KFD
Sbjct: 544 LYGPRVKFD 552


>ref|XP_002510861.1| molybdopterin cofactor sulfurase, putative [Ricinus communis]
           gi|223549976|gb|EEF51463.1| molybdopterin cofactor
           sulfurase, putative [Ricinus communis]
          Length = 664

 Score =  107 bits (267), Expect = 1e-21
 Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 7/184 (3%)
 Frame = -3

Query: 531 GIASLVPVKRTYPLLGXXXXXXXDTQQKAEFGEQEDVLPITSSYSGPISA-------QVE 373
           G+ +L+P K+ +  L        + +  ++F  +ED L  ++S+SGPIS        Q  
Sbjct: 365 GMVNLIPAKKLFWFLDESSGTDTEIEHMSKFEIEEDELDTSNSFSGPISISKLQSGIQQG 424

Query: 372 IRDDKCLSSTERHNEESEHGETSELRETEPCTEQMNYLTSEIVEVPSDSVKLETTQINTA 193
              +     T R  + S+ GE    ++ E  T        E+    +D VK     IN++
Sbjct: 425 ETSEPQTGVTTREQKVSQTGEPETAQQQELETTGAAAKQKELETSQNDKVK---KTINSS 481

Query: 192 EADRKVSIECRGLDHADSLGLINISTRARCQINWVVNALSKLQHPHTEKGLPLVQIYGPK 13
             +  + IECRGLD  D LGL  IS RARC INW+VNAL KL+HP+ E+ +PLV+IYGPK
Sbjct: 482 R-NGTMEIECRGLDEVDLLGLTQISNRARCLINWLVNALMKLKHPNNEE-VPLVRIYGPK 539

Query: 12  IKFD 1
           I+FD
Sbjct: 540 IRFD 543


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