BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038335
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15
emb|CBI35582.3| unnamed protein product [Vitis vinifera]               84   9e-15
emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]    84   1e-14
ref|XP_002306200.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13

>ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 503

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
 Frame = -3

Query: 273 NKEP-NKTLQFFEQMRLRDVKPDKFTFPFVIRACADLGLVKKGQWVHGQVIKVCLSVDVF 97
           N +P  + L+ ++ MR R + P+ +T+PFV++AC   G  KKG+ +HG  +K  + +D+F
Sbjct: 95  NADPFGEALKVYDAMRWRGITPNYYTYPFVLKACGAEGASKKGRVIHGHAVKCGMDLDLF 154

Query: 96  IATNLIEFYVSCVSVSVAHKVFDEMPVKDTVS 1
           +   L+ FY  C  V V+ KVFDE+P +D VS
Sbjct: 155 VGNALVAFYAKCQDVEVSRKVFDEIPHRDIVS 186


>emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/84 (48%), Positives = 55/84 (65%)
 Frame = -3

Query: 252 LQFFEQMRLRDVKPDKFTFPFVIRACADLGLVKKGQWVHGQVIKVCLSVDVFIATNLIEF 73
           L+ + QM    V+PD  TFPFV++ACAD   V+KG+ VHG V+K+    DVF+   L+ F
Sbjct: 26  LEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSF 85

Query: 72  YVSCVSVSVAHKVFDEMPVKDTVS 1
           Y +C  +  A +VFDEMP KD VS
Sbjct: 86  YGNCGGLRDAGRVFDEMPEKDLVS 109



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 28/87 (32%), Positives = 53/87 (60%)
 Frame = -3

Query: 261 NKTLQFFEQMRLRDVKPDKFTFPFVIRACADLGLVKKGQWVHGQVIKVCLSVDVFIATNL 82
           +++L  F +M+L  +K D  +F   + ACA+L  +K+G+ +HG +++    + +F+A +L
Sbjct: 326 SESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSL 385

Query: 81  IEFYVSCVSVSVAHKVFDEMPVKDTVS 1
           ++FY  C  + +A  +FD M  KD  S
Sbjct: 386 LDFYTKCGRIGLARNIFDRMTNKDVAS 412


>emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]
          Length = 672

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/84 (48%), Positives = 55/84 (65%)
 Frame = -3

Query: 252 LQFFEQMRLRDVKPDKFTFPFVIRACADLGLVKKGQWVHGQVIKVCLSVDVFIATNLIEF 73
           L+ + QM    V+PD  TFPFV++ACAD   V+KG+ VHG V+K+    DVF+   L+ F
Sbjct: 26  LEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGXVVKLGFESDVFVGNTLLSF 85

Query: 72  YVSCVSVSVAHKVFDEMPVKDTVS 1
           Y +C  +  A +VFDEMP KD VS
Sbjct: 86  YGNCGGLRDAGRVFDEMPEKDLVS 109



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 28/87 (32%), Positives = 53/87 (60%)
 Frame = -3

Query: 261 NKTLQFFEQMRLRDVKPDKFTFPFVIRACADLGLVKKGQWVHGQVIKVCLSVDVFIATNL 82
           +++L  F +M+L  +K D  +F   + ACA+L  +K+G+ +HG +++    + +F+A +L
Sbjct: 427 SESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSL 486

Query: 81  IEFYVSCVSVSVAHKVFDEMPVKDTVS 1
           ++FY  C  + +A  +FD M  KD  S
Sbjct: 487 LDFYTKCGRIGLARNIFDRMTNKDVAS 513


>ref|XP_002306200.1| predicted protein [Populus trichocarpa] gi|222849164|gb|EEE86711.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/86 (43%), Positives = 57/86 (66%)
 Frame = -3

Query: 258 KTLQFFEQMRLRDVKPDKFTFPFVIRACADLGLVKKGQWVHGQVIKVCLSVDVFIATNLI 79
           + + F+ +M    ++ D FTFPFVI+AC +L  +  GQ VHG++IK+   +DV++   LI
Sbjct: 107 EAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLI 166

Query: 78  EFYVSCVSVSVAHKVFDEMPVKDTVS 1
           + Y+    + +A KVFDEMPV+D VS
Sbjct: 167 DMYLKIGFIELAEKVFDEMPVRDLVS 192


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/85 (41%), Positives = 57/85 (67%)
 Frame = -3

Query: 276 RNKEPNKTLQFFEQMRLRDVKPDKFTFPFVIRACADLGLVKKGQWVHGQVIKVCLSVDVF 97
           +N   N+ + +F +M+L+++KPD FT   VI A A+L ++ + +W+HG VI+ CL  +VF
Sbjct: 455 QNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVF 514

Query: 96  IATNLIEFYVSCVSVSVAHKVFDEM 22
           +AT L++ Y  C +V  A K+FD M
Sbjct: 515 VATALVDMYAKCGAVHTARKLFDMM 539



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/91 (32%), Positives = 51/91 (56%)
 Frame = -3

Query: 276 RNKEPNKTLQFFEQMRLRDVKPDKFTFPFVIRACADLGLVKKGQWVHGQVIKVCLSVDVF 97
           RN   +  + FF +MR   V+P  + F ++++ C D   ++KG+ +H Q+I    + +VF
Sbjct: 152 RNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVF 211

Query: 96  IATNLIEFYVSCVSVSVAHKVFDEMPVKDTV 4
             T ++  Y  C  V  A+K+FD MP +D V
Sbjct: 212 AMTGVVNMYAKCRLVEEAYKMFDRMPERDLV 242



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/92 (31%), Positives = 51/92 (55%)
 Frame = -3

Query: 276 RNKEPNKTLQFFEQMRLRDVKPDKFTFPFVIRACADLGLVKKGQWVHGQVIKVCLSVDVF 97
           +N +P   ++ F++M    V+    T    + ACADLG V++G++VH  + ++ L  DV 
Sbjct: 354 QNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVS 413

Query: 96  IATNLIEFYVSCVSVSVAHKVFDEMPVKDTVS 1
           +  +LI  Y  C  V +A ++F+ +  K  VS
Sbjct: 414 VMNSLISMYSKCKRVDIAAEIFENLQHKTLVS 445