BLASTX nr result
ID: Coptis25_contig00038329
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038329 (322 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN61108.1| hypothetical protein VITISV_011301 [Vitis vinifera] 47 1e-10 emb|CAB75932.1| putative protein [Arabidopsis thaliana] 46 9e-09 emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera] 44 7e-08 emb|CAN83995.1| hypothetical protein VITISV_031192 [Vitis vinifera] 42 1e-07 emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera] 41 2e-07 >emb|CAN61108.1| hypothetical protein VITISV_011301 [Vitis vinifera] Length = 329 Score = 46.6 bits (109), Expect(2) = 1e-10 Identities = 21/33 (63%), Positives = 23/33 (69%) Frame = +3 Query: 216 KDQEVAMELCESEDQVADILTKPLNADAFYKLK 314 K QE+ +E C SEDQV DI TKPL D F KLK Sbjct: 281 KKQEIKLEYCRSEDQVVDIFTKPLKIDVFKKLK 313 Score = 43.9 bits (102), Expect(2) = 1e-10 Identities = 19/32 (59%), Positives = 24/32 (75%) Frame = +1 Query: 142 KNPVLHGRSKHIKIKFHYIRKLDNAKTRKLQW 237 KNP+ H RSKHI IKFHYIR+L + KL++ Sbjct: 258 KNPMFHDRSKHISIKFHYIRELVKKQEIKLEY 289 >emb|CAB75932.1| putative protein [Arabidopsis thaliana] Length = 1339 Score = 45.8 bits (107), Expect(2) = 9e-09 Identities = 18/32 (56%), Positives = 26/32 (81%) Frame = +1 Query: 142 KNPVLHGRSKHIKIKFHYIRKLDNAKTRKLQW 237 K+PVLHG+SKHI+++FHY+R L N KL++ Sbjct: 1272 KHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEY 1303 Score = 38.5 bits (88), Expect(2) = 9e-09 Identities = 17/29 (58%), Positives = 21/29 (72%) Frame = +3 Query: 228 VAMELCESEDQVADILTKPLNADAFYKLK 314 V +E C +EDQVADI TKPL + F KL+ Sbjct: 1299 VKLEYCPTEDQVADIFTKPLKLEQFEKLR 1327 >emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera] Length = 1278 Score = 43.5 bits (101), Expect(2) = 7e-08 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = +3 Query: 213 CKDQEVAMELCESEDQVADILTKPLNADAFYKLK 314 CKD + + C+SEDQ+ADILTKPL F KL+ Sbjct: 1222 CKDGVIDLVFCKSEDQIADILTKPLKPVVFMKLR 1255 Score = 37.7 bits (86), Expect(2) = 7e-08 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 4/55 (7%) Frame = +1 Query: 55 LW*ERISTTLKDTRTRHGKTV----DLDHI*CIKNPVLHGRSKHIKIKFHYIRKL 207 +W R+ L + + G TV +L I KN VLHGRSKHI +++H++R L Sbjct: 1169 IWLRRLLEVLYNQQ--QGPTVIYCDNLSAIKLSKNLVLHGRSKHIDVRYHFLRDL 1221 >emb|CAN83995.1| hypothetical protein VITISV_031192 [Vitis vinifera] Length = 288 Score = 42.0 bits (97), Expect(2) = 1e-07 Identities = 16/30 (53%), Positives = 23/30 (76%) Frame = +1 Query: 142 KNPVLHGRSKHIKIKFHYIRKLDNAKTRKL 231 KNPV+HGRS+HI ++FH++R L + KL Sbjct: 221 KNPVMHGRSRHIDVRFHFLRDLTKEEVVKL 250 Score = 38.5 bits (88), Expect(2) = 1e-07 Identities = 17/34 (50%), Positives = 24/34 (70%) Frame = +3 Query: 216 KDQEVAMELCESEDQVADILTKPLNADAFYKLKQ 317 K++ V + C + DQVADILTKPL + F KL++ Sbjct: 244 KEEVVKLVHCGTNDQVADILTKPLKLEVFLKLRE 277 >emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera] Length = 1146 Score = 41.2 bits (95), Expect(2) = 2e-07 Identities = 15/22 (68%), Positives = 20/22 (90%) Frame = +1 Query: 142 KNPVLHGRSKHIKIKFHYIRKL 207 KNPV+HGRSKHI ++FH++R L Sbjct: 984 KNPVMHGRSKHIDVRFHFLRDL 1005 Score = 38.5 bits (88), Expect(2) = 2e-07 Identities = 15/35 (42%), Positives = 26/35 (74%) Frame = +3 Query: 216 KDQEVAMELCESEDQVADILTKPLNADAFYKLKQN 320 +D + ++ C +++QVADI+TKPL D F KL+++ Sbjct: 1007 RDGVIELKHCVTQEQVADIMTKPLKLDVFLKLRES 1041