BLASTX nr result

ID: Coptis25_contig00038329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038329
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61108.1| hypothetical protein VITISV_011301 [Vitis vinifera]    47   1e-10
emb|CAB75932.1| putative protein [Arabidopsis thaliana]                46   9e-09
emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]    44   7e-08
emb|CAN83995.1| hypothetical protein VITISV_031192 [Vitis vinifera]    42   1e-07
emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera]    41   2e-07

>emb|CAN61108.1| hypothetical protein VITISV_011301 [Vitis vinifera]
          Length = 329

 Score = 46.6 bits (109), Expect(2) = 1e-10
 Identities = 21/33 (63%), Positives = 23/33 (69%)
 Frame = +3

Query: 216 KDQEVAMELCESEDQVADILTKPLNADAFYKLK 314
           K QE+ +E C SEDQV DI TKPL  D F KLK
Sbjct: 281 KKQEIKLEYCRSEDQVVDIFTKPLKIDVFKKLK 313



 Score = 43.9 bits (102), Expect(2) = 1e-10
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +1

Query: 142 KNPVLHGRSKHIKIKFHYIRKLDNAKTRKLQW 237
           KNP+ H RSKHI IKFHYIR+L   +  KL++
Sbjct: 258 KNPMFHDRSKHISIKFHYIRELVKKQEIKLEY 289


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score = 45.8 bits (107), Expect(2) = 9e-09
 Identities = 18/32 (56%), Positives = 26/32 (81%)
 Frame = +1

Query: 142  KNPVLHGRSKHIKIKFHYIRKLDNAKTRKLQW 237
            K+PVLHG+SKHI+++FHY+R L N    KL++
Sbjct: 1272 KHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEY 1303



 Score = 38.5 bits (88), Expect(2) = 9e-09
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = +3

Query: 228  VAMELCESEDQVADILTKPLNADAFYKLK 314
            V +E C +EDQVADI TKPL  + F KL+
Sbjct: 1299 VKLEYCPTEDQVADIFTKPLKLEQFEKLR 1327


>emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]
          Length = 1278

 Score = 43.5 bits (101), Expect(2) = 7e-08
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +3

Query: 213  CKDQEVAMELCESEDQVADILTKPLNADAFYKLK 314
            CKD  + +  C+SEDQ+ADILTKPL    F KL+
Sbjct: 1222 CKDGVIDLVFCKSEDQIADILTKPLKPVVFMKLR 1255



 Score = 37.7 bits (86), Expect(2) = 7e-08
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = +1

Query: 55   LW*ERISTTLKDTRTRHGKTV----DLDHI*CIKNPVLHGRSKHIKIKFHYIRKL 207
            +W  R+   L + +   G TV    +L  I   KN VLHGRSKHI +++H++R L
Sbjct: 1169 IWLRRLLEVLYNQQ--QGPTVIYCDNLSAIKLSKNLVLHGRSKHIDVRYHFLRDL 1221


>emb|CAN83995.1| hypothetical protein VITISV_031192 [Vitis vinifera]
          Length = 288

 Score = 42.0 bits (97), Expect(2) = 1e-07
 Identities = 16/30 (53%), Positives = 23/30 (76%)
 Frame = +1

Query: 142 KNPVLHGRSKHIKIKFHYIRKLDNAKTRKL 231
           KNPV+HGRS+HI ++FH++R L   +  KL
Sbjct: 221 KNPVMHGRSRHIDVRFHFLRDLTKEEVVKL 250



 Score = 38.5 bits (88), Expect(2) = 1e-07
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +3

Query: 216 KDQEVAMELCESEDQVADILTKPLNADAFYKLKQ 317
           K++ V +  C + DQVADILTKPL  + F KL++
Sbjct: 244 KEEVVKLVHCGTNDQVADILTKPLKLEVFLKLRE 277


>emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera]
          Length = 1146

 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +1

Query: 142  KNPVLHGRSKHIKIKFHYIRKL 207
            KNPV+HGRSKHI ++FH++R L
Sbjct: 984  KNPVMHGRSKHIDVRFHFLRDL 1005



 Score = 38.5 bits (88), Expect(2) = 2e-07
 Identities = 15/35 (42%), Positives = 26/35 (74%)
 Frame = +3

Query: 216  KDQEVAMELCESEDQVADILTKPLNADAFYKLKQN 320
            +D  + ++ C +++QVADI+TKPL  D F KL+++
Sbjct: 1007 RDGVIELKHCVTQEQVADIMTKPLKLDVFLKLRES 1041


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