BLASTX nr result

ID: Coptis25_contig00038327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038327
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thal...    68   4e-09
gb|EEC72408.1| hypothetical protein OsI_05703 [Oryza sativa Indi...    62   2e-07
gb|EEE66797.1| hypothetical protein OsJ_23543 [Oryza sativa Japo...    62   3e-07
ref|NP_001059179.1| Os07g0212400 [Oryza sativa Japonica Group] g...    62   3e-07
ref|NP_001045774.1| Os02g0129000 [Oryza sativa Japonica Group] g...    62   3e-07

>dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thaliana]
          Length = 1516

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 26/202 (12%)
 Frame = -1

Query: 960  KTMNIRETNAKNR--QALDVYHTSGRHGSARVAHMMNKKRKAAGAKPVTRVDVWIETHTC 787
            KT   +E + K R  +   + HT+ R G   +AH M  K+K++  K VTR  VWI  HT 
Sbjct: 1053 KTTAFKEISDKYRMLRKAQIPHTTSRKGMISLAHEM--KKKSSNPKLVTRSKVWIAGHTH 1110

Query: 786  KDGSTSKT-VAPIMGQVKQLNSAQTEEDSQDILQDPLTKVIGLDKGVRTRGVGSTVSRTQ 610
             DG   K   A  + ++K ++S        D+ +D +++V+G DK  R RG+G  V+ T+
Sbjct: 1111 SDGRPVKPEFAETIEKIKSIDSEMDSSSFTDLKEDAVSQVLGKDKPGRLRGMGRGVTATK 1170

Query: 609  ---VLASIPAQEK--------LAELEKERNV-------KDQTINVLKSDVEYLKSTV-AD 487
               +LA     EK        L +LE  +NV       K+    V +S+   + + V   
Sbjct: 1171 LAFMLARDSHVEKLEATQADLLTKLEDLQNVVHGLAAKKEHVEEVSRSEASNVSAGVRCQ 1230

Query: 486  IKDWCTRNQ----HGSSCSQHE 433
            + DWC  +      G  CS  +
Sbjct: 1231 LLDWCKDDDVVVGEGEFCSAEQ 1252


>gb|EEC72408.1| hypothetical protein OsI_05703 [Oryza sativa Indica Group]
          Length = 753

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 5/168 (2%)
 Frame = -1

Query: 1056 DTCDTNEMRLNNVPDGIRREDWADFVAYEATAKTMNIRETNAKNRQALDVYHTSGRHGSA 877
            D  +T E   NNVP+G+  + W   V +    K+  I E N KN Q     HT+G    A
Sbjct: 211  DVNETKEANCNNVPEGVLSDQWIALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFA 270

Query: 876  RVAHMMNKKRKAAGAKPVTRVDVWIETHTCKDGSTSKTVAPIMGQVKQLNS-----AQTE 712
            R    M +K  A   K   R  V++ TH  K   + K +   +  +K+L +     A   
Sbjct: 271  RTREEMRQKDPA--KKNPHRAVVYVHTHKRK---SDKNINGHVDNLKRLIAEQPALADAS 325

Query: 711  EDSQDILQDPLTKVIGLDKGVRTRGVGSTVSRTQVLASIPAQEKLAEL 568
            +       D L +++G DK  R  G+G      QVL  +P   +L  +
Sbjct: 326  KGKTAWKGDALNQILGDDKPGRVHGLGLVPKAKQVL-DVPTSRRLQNI 372


>gb|EEE66797.1| hypothetical protein OsJ_23543 [Oryza sativa Japonica Group]
          Length = 753

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 5/168 (2%)
 Frame = -1

Query: 1056 DTCDTNEMRLNNVPDGIRREDWADFVAYEATAKTMNIRETNAKNRQALDVYHTSGRHGSA 877
            D  +T E   NNVP+G+  + W   V +    K+  I E N KN Q     HT+G    A
Sbjct: 211  DVNETKEANCNNVPEGVLSDQWIALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFA 270

Query: 876  RVAHMMNKKRKAAGAKPVTRVDVWIETHTCKDGSTSKTVAPIMGQVKQLNS-----AQTE 712
            R    M +K  A   K   R  V++ TH  K   + K +   +  +K+L +     A   
Sbjct: 271  RTREEMRQKDPA--KKNPHRAVVYVHTHKRK---SDKNINGHVDNLKRLIAEQPALADAS 325

Query: 711  EDSQDILQDPLTKVIGLDKGVRTRGVGSTVSRTQVLASIPAQEKLAEL 568
            +       D L +++G DK  R  G+G      QVL  +P   +L  +
Sbjct: 326  KGKTAWKGDALNQILGDDKPGRVHGLGLVPKPKQVL-DVPTSRRLQNI 372


>ref|NP_001059179.1| Os07g0212400 [Oryza sativa Japonica Group]
            gi|113610715|dbj|BAF21093.1| Os07g0212400 [Oryza sativa
            Japonica Group]
          Length = 685

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 5/168 (2%)
 Frame = -1

Query: 1056 DTCDTNEMRLNNVPDGIRREDWADFVAYEATAKTMNIRETNAKNRQALDVYHTSGRHGSA 877
            D  +T E   NNVP+G+  + W   V +    K+  I E N KN Q     HT+G    A
Sbjct: 211  DVNETKEANCNNVPEGVLSDQWIALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFA 270

Query: 876  RVAHMMNKKRKAAGAKPVTRVDVWIETHTCKDGSTSKTVAPIMGQVKQLNS-----AQTE 712
            R    M +K  A   K   R  V++ TH  K   + K +   +  +K+L +     A   
Sbjct: 271  RTREEMRQKDPA--KKNPHRAVVYVHTHKRK---SDKNINGHVDNLKRLIAEQPALADAS 325

Query: 711  EDSQDILQDPLTKVIGLDKGVRTRGVGSTVSRTQVLASIPAQEKLAEL 568
            +       D L +++G DK  R  G+G      QVL  +P   +L  +
Sbjct: 326  KGKTAWKGDALNQILGDDKPGRVHGLGLVPKPKQVL-DVPTSRRLQNI 372


>ref|NP_001045774.1| Os02g0129000 [Oryza sativa Japonica Group]
            gi|113535305|dbj|BAF07688.1| Os02g0129000 [Oryza sativa
            Japonica Group]
          Length = 750

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 5/168 (2%)
 Frame = -1

Query: 1056 DTCDTNEMRLNNVPDGIRREDWADFVAYEATAKTMNIRETNAKNRQALDVYHTSGRHGSA 877
            D  +T E   NNVP+G+  + W   V +    K+  I E N KN Q     HT+G    A
Sbjct: 208  DVNETKEANCNNVPEGVLSDQWIALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFA 267

Query: 876  RVAHMMNKKRKAAGAKPVTRVDVWIETHTCKDGSTSKTVAPIMGQVKQLNS-----AQTE 712
            R    M +K  A   K   R  V++ TH  K   + K +   +  +K+L +     A   
Sbjct: 268  RTREEMRQKDPA--KKYPHRAVVYVHTHKRK---SDKNINGHVDNLKRLIAEQPALADAS 322

Query: 711  EDSQDILQDPLTKVIGLDKGVRTRGVGSTVSRTQVLASIPAQEKLAEL 568
            +       D L +++G DK  R  G+G      QVL  +P   +L  +
Sbjct: 323  KGKTAWKGDALNQILGDDKPGRVHGLGLVPKPKQVL-DVPTSRRLQNI 369


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