BLASTX nr result

ID: Coptis25_contig00038303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038303
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20804.3| unnamed protein product [Vitis vinifera]              168   4e-40
ref|XP_002280927.1| PREDICTED: uncharacterized protein LOC100262...   168   4e-40
ref|XP_002332122.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39
ref|XP_002330831.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_003545561.1| PREDICTED: uncharacterized protein LOC100783...   160   8e-38

>emb|CBI20804.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/105 (75%), Positives = 92/105 (87%)
 Frame = -1

Query: 315 VYRTGVFLLVCVFFRLTCELQILRFEGFKKLFERCGSDSAVMFREHIRIRKQLSITSHMY 136
           +YRTG+FLLVCV FRLTCELQILRFEGF+KL E CGSD+ V+FREH+RIRKQLS+TSH Y
Sbjct: 217 IYRTGLFLLVCVLFRLTCELQILRFEGFQKLLEGCGSDAGVIFREHMRIRKQLSVTSHRY 276

Query: 135 RFFIVMCLVTITFSQFGFLFLVFASKSEKSFFNAGDFMVCSAVQL 1
           RFFI+ CL+TIT SQ G L +V ASKS K+FFN+GD +VCSAVQL
Sbjct: 277 RFFIIGCLITITVSQLGALLIVLASKSNKTFFNSGDLVVCSAVQL 321


>ref|XP_002280927.1| PREDICTED: uncharacterized protein LOC100262807 [Vitis vinifera]
          Length = 460

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/105 (75%), Positives = 92/105 (87%)
 Frame = -1

Query: 315 VYRTGVFLLVCVFFRLTCELQILRFEGFKKLFERCGSDSAVMFREHIRIRKQLSITSHMY 136
           +YRTG+FLLVCV FRLTCELQILRFEGF+KL E CGSD+ V+FREH+RIRKQLS+TSH Y
Sbjct: 217 IYRTGLFLLVCVLFRLTCELQILRFEGFQKLLEGCGSDAGVIFREHMRIRKQLSVTSHRY 276

Query: 135 RFFIVMCLVTITFSQFGFLFLVFASKSEKSFFNAGDFMVCSAVQL 1
           RFFI+ CL+TIT SQ G L +V ASKS K+FFN+GD +VCSAVQL
Sbjct: 277 RFFIIGCLITITVSQLGALLIVLASKSNKTFFNSGDLVVCSAVQL 321


>ref|XP_002332122.1| predicted protein [Populus trichocarpa] gi|222874942|gb|EEF12073.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  164 bits (416), Expect = 5e-39
 Identities = 78/105 (74%), Positives = 89/105 (84%)
 Frame = -1

Query: 315 VYRTGVFLLVCVFFRLTCELQILRFEGFKKLFERCGSDSAVMFREHIRIRKQLSITSHMY 136
           VYRTGVFLLVCV FRLTCELQILRFEG  KLFE CGS + V+FREH+RI+KQLS+TSH Y
Sbjct: 223 VYRTGVFLLVCVLFRLTCELQILRFEGLHKLFEGCGSGAGVIFREHVRIKKQLSLTSHRY 282

Query: 135 RFFIVMCLVTITFSQFGFLFLVFASKSEKSFFNAGDFMVCSAVQL 1
           RFFI+ CLVTIT SQFG L LV    ++KSFFN+GD ++CSAVQL
Sbjct: 283 RFFIISCLVTITVSQFGALLLVLGFNTQKSFFNSGDLVICSAVQL 327


>ref|XP_002330831.1| predicted protein [Populus trichocarpa] gi|222872633|gb|EEF09764.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/105 (73%), Positives = 88/105 (83%)
 Frame = -1

Query: 315 VYRTGVFLLVCVFFRLTCELQILRFEGFKKLFERCGSDSAVMFREHIRIRKQLSITSHMY 136
           VYRTGVFLLVCV FRLTCELQILRFEG  KLF+ C SD+ V+FREH+RI+KQLS TSH Y
Sbjct: 174 VYRTGVFLLVCVLFRLTCELQILRFEGLHKLFDGCESDAGVIFREHVRIKKQLSFTSHRY 233

Query: 135 RFFIVMCLVTITFSQFGFLFLVFASKSEKSFFNAGDFMVCSAVQL 1
           RFFI+ CLVTIT SQFG L LV    +EK+FFN+GD ++CSAVQL
Sbjct: 234 RFFIISCLVTITVSQFGSLLLVLGFNNEKNFFNSGDLVICSAVQL 278


>ref|XP_003545561.1| PREDICTED: uncharacterized protein LOC100783743 [Glycine max]
          Length = 455

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/105 (72%), Positives = 90/105 (85%)
 Frame = -1

Query: 315 VYRTGVFLLVCVFFRLTCELQILRFEGFKKLFERCGSDSAVMFREHIRIRKQLSITSHMY 136
           VYRTGVFLLVCV FRLTCELQ LRFEG  KLFE CGS++ V+F+EH+RIR+QL +TSH Y
Sbjct: 225 VYRTGVFLLVCVLFRLTCELQKLRFEGVHKLFEGCGSEAGVIFKEHVRIRRQLWVTSHRY 284

Query: 135 RFFIVMCLVTITFSQFGFLFLVFASKSEKSFFNAGDFMVCSAVQL 1
           RFFI+ C+VTIT SQ G L LV ASKS+K+FFN+GD ++CSAVQL
Sbjct: 285 RFFIIGCVVTITVSQLGALLLVLASKSDKTFFNSGDLVICSAVQL 329


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