BLASTX nr result

ID: Coptis25_contig00038295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038295
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37208.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258...    58   7e-07
emb|CAN61503.1| hypothetical protein VITISV_011734 [Vitis vinifera]    57   2e-06

>emb|CBI37208.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
 Frame = +2

Query: 2   STDKEEIWKLQRKYFGQVNKAPSSALDDPANTLPIAPPVHKSIPALTHLQTLNSVHSQIP 181
           +T+K+E W  QRK F ++ K+    +   A  LP     + S P L      N +     
Sbjct: 160 ATNKDEFWVDQRKSF-RLGKSQQVPIQKHATALPQVSQ-NSSFPLLQP----NPIWQN-- 211

Query: 182 AVSNSPTLRSCSSTSNFGVPNIISNRNHQQSGVTVSRSRL-PHQVASRSTALAPGSGSIA 358
            VS   ++ +CSS +N GVPN  S   +Q+S V + R+R  PH V+ +        G+ +
Sbjct: 212 QVSRPTSIHACSSRTNVGVPNTASLTRNQRSEVDLGRTRFQPHLVSQKP------HGTQS 265

Query: 359 SNIIRRDKDNGAGTLGPRF 415
           + I R+D+ +G G LGP+F
Sbjct: 266 NIINRKDRGHGFGPLGPQF 284


>ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258397 [Vitis vinifera]
          Length = 511

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
 Frame = +2

Query: 2   STDKEEIWKLQRKYFGQVNKAPSSALDDPANTLPIAPPVHKSIPALTHLQTLNSVHSQIP 181
           +T+K+E W  QRK F ++ K+    +   A  LP     + S P L      N +     
Sbjct: 160 ATNKDEFWVDQRKSF-RLGKSQQVPIQKHATALPQVSQ-NSSFPLLQP----NPIWQN-- 211

Query: 182 AVSNSPTLRSCSSTSNFGVPNIISNRNHQQSGVTVSRSRL-PHQVASRSTALAPGSGSIA 358
            VS   ++ +CSS +N GVPN  S   +Q+S V + R+R  PH V+ +        G+ +
Sbjct: 212 QVSRPTSIHACSSRTNVGVPNTASLTRNQRSEVDLGRTRFQPHLVSQKP------HGTQS 265

Query: 359 SNIIRRDKDNGAGTLGPRF 415
           + I R+D+ +G G LGP+F
Sbjct: 266 NIINRKDRGHGFGPLGPQF 284


>emb|CAN61503.1| hypothetical protein VITISV_011734 [Vitis vinifera]
          Length = 441

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
 Frame = +2

Query: 2   STDKEEIWKLQRKYFGQVNKAPSSALDDPANTLPIAPPVHKSIPALTHLQTLNSVHSQIP 181
           +T+K+E W  QRK F ++ K+    +   A  LP     + S P L      N +     
Sbjct: 90  ATNKDEFWVNQRKSF-RLGKSQQVPIQKHATALPQVSQ-NSSFPLLQP----NPIWQN-- 141

Query: 182 AVSNSPTLRSCSSTSNFGVPNIISNRNHQQSGVTVSRSRL-PHQVASRSTALAPGSGSIA 358
            VS   ++ +CSS +N GVPN  S   +Q+S V + R+R  PH V+ +        G+ +
Sbjct: 142 QVSRPTSIHACSSRTNVGVPNTASLTRNQRSEVDLGRTRFQPHLVSQKP------HGTQS 195

Query: 359 SNIIRRDKDNGAGTLGPRF 415
           +   R+D+ +G G LGP+F
Sbjct: 196 NIXNRKDRGHGFGPLGPQF 214


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