BLASTX nr result

ID: Coptis25_contig00038286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038286
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554283.1| PREDICTED: LOB domain-containing protein 16-...   224   9e-57
ref|XP_002306833.1| predicted protein [Populus trichocarpa] gi|2...   223   3e-56
ref|XP_003521280.1| PREDICTED: LOB domain-containing protein 16-...   219   3e-55
ref|XP_002521022.1| LOB domain-containing protein, putative [Ric...   219   3e-55
ref|XP_002302057.1| predicted protein [Populus trichocarpa] gi|2...   217   2e-54

>ref|XP_003554283.1| PREDICTED: LOB domain-containing protein 16-like [Glycine max]
          Length = 213

 Score =  224 bits (571), Expect = 9e-57
 Identities = 105/127 (82%), Positives = 118/127 (92%)
 Frame = -2

Query: 416 ASGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPIPD 237
           ++GTGSPCGACKFLRRKCA+DCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLH+P  D
Sbjct: 10  SNGTGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHD 69

Query: 236 RCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVGYLQSQLMQVKAQLSNNLVEAQSLGN 57
           RCEAVVTIAYEAQARIRDPVYGCV+HIFALQQQV  LQ+QLMQVKAQL+ NLVE++++ +
Sbjct: 70  RCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAQLAQNLVESRNIES 129

Query: 56  HQYWAGN 36
           +  W GN
Sbjct: 130 NHQWTGN 136


>ref|XP_002306833.1| predicted protein [Populus trichocarpa] gi|222856282|gb|EEE93829.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  223 bits (567), Expect = 3e-56
 Identities = 107/133 (80%), Positives = 117/133 (87%), Gaps = 3/133 (2%)
 Frame = -2

Query: 413 SGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPIPDR 234
           +GTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVP+ +R
Sbjct: 6   TGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPVAER 65

Query: 233 CEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVGYLQSQLMQVKAQLSNNLVEAQSLGN- 57
           CEAVVTIAYEAQARIRDPVYGCVAHIFALQQQV  LQ+QLMQVKAQL+ NL+++  +   
Sbjct: 66  CEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQLMQVKAQLAQNLIDSPRINAE 125

Query: 56  --HQYWAGNLVGG 24
             H  W GN + G
Sbjct: 126 NIHHQWQGNNISG 138


>ref|XP_003521280.1| PREDICTED: LOB domain-containing protein 16-like [Glycine max]
          Length = 213

 Score =  219 bits (558), Expect = 3e-55
 Identities = 103/128 (80%), Positives = 118/128 (92%)
 Frame = -2

Query: 419 MASGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPIP 240
           +++G+GSPCGACKFLRR+CASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLH+P  
Sbjct: 9   VSNGSGSPCGACKFLRRRCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAH 68

Query: 239 DRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVGYLQSQLMQVKAQLSNNLVEAQSLG 60
           DRCEAVVTI YEAQARIRDPVYGCV+HIFALQQQV  LQ+QLMQVKAQL+ NLVE++++ 
Sbjct: 69  DRCEAVVTITYEAQARIRDPVYGCVSHIFALQQQVARLQAQLMQVKAQLTQNLVESRNIE 128

Query: 59  NHQYWAGN 36
           N+ +  GN
Sbjct: 129 NNHHLQGN 136


>ref|XP_002521022.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223539859|gb|EEF41439.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 212

 Score =  219 bits (558), Expect = 3e-55
 Identities = 105/129 (81%), Positives = 116/129 (89%)
 Frame = -2

Query: 413 SGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPIPDR 234
           SGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVP+ DR
Sbjct: 6   SGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPVADR 65

Query: 233 CEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVGYLQSQLMQVKAQLSNNLVEAQSLGNH 54
           CEAVVTIAYEAQARIRDPVYGCVAHIF+LQQQV  LQ+QLMQVKAQL+ ++V++     +
Sbjct: 66  CEAVVTIAYEAQARIRDPVYGCVAHIFSLQQQVACLQAQLMQVKAQLAQSMVDSSRNMEN 125

Query: 53  QYWAGNLVG 27
           Q+   N+ G
Sbjct: 126 QWQGNNICG 134


>ref|XP_002302057.1| predicted protein [Populus trichocarpa] gi|222843783|gb|EEE81330.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  217 bits (552), Expect = 2e-54
 Identities = 105/136 (77%), Positives = 116/136 (85%), Gaps = 3/136 (2%)
 Frame = -2

Query: 413 SGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPIPDR 234
           +GTGSPCGACKFLRRKCASDCIFAPYFCSEQG ARFAAIHKVFGASNVSKLLLHVP+ DR
Sbjct: 6   TGTGSPCGACKFLRRKCASDCIFAPYFCSEQGTARFAAIHKVFGASNVSKLLLHVPVADR 65

Query: 233 CEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVGYLQSQLMQVKAQLSNNLVEAQSL--- 63
            EAVVTIAYEAQARIRDPVYGCVAHIF+LQQQV  LQ+QLMQVKAQL+ NL+++  +   
Sbjct: 66  YEAVVTIAYEAQARIRDPVYGCVAHIFSLQQQVACLQAQLMQVKAQLAQNLIDSTRINIE 125

Query: 62  GNHQYWAGNLVGGTQN 15
             H  W GN + G  +
Sbjct: 126 NTHHQWQGNNISGVSS 141


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