BLASTX nr result
ID: Coptis25_contig00038284
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038284 (435 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003530402.1| PREDICTED: CST complex subunit CTC1-like [Gl... 58 7e-07 ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi... 58 9e-07 emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera] 57 1e-06 ref|XP_002302447.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 >ref|XP_003530402.1| PREDICTED: CST complex subunit CTC1-like [Glycine max] Length = 706 Score = 58.2 bits (139), Expect = 7e-07 Identities = 40/141 (28%), Positives = 65/141 (46%) Frame = +1 Query: 1 SKENLKEHLECTCRTNSSEDQRHKKPKLSHGSTRVLTANLKDNIGETESGCDSSDCGTSV 180 S + KE + N+ + +K+ KL S +I E + C +S Sbjct: 330 SWDKTKELSKYCISVNNEDKVSNKRQKLIKESVSSSKDEFHTSICELNA-CSNSSRKPEE 388 Query: 181 DQKSSELKSSHRLRCLVLMRSFKNQTPVRPGILLRANSNGKDGTLGKLSCRKIMLEFKSD 360 ++K L+SSH + CLV R +N+ V IL + + K S RKI+LEF SD Sbjct: 389 NKKCVNLRSSHDVSCLVTFRRHENENVVCTAILRSISPMKETSFNSKPSSRKILLEFSSD 448 Query: 361 IYNSCQFLHVGGYYVMKYGKE 423 + Q L +G YY++ + ++ Sbjct: 449 RFLKYQLLQIGDYYIIDHNRK 469 >ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera] Length = 1215 Score = 57.8 bits (138), Expect = 9e-07 Identities = 43/138 (31%), Positives = 62/138 (44%) Frame = +1 Query: 1 SKENLKEHLECTCRTNSSEDQRHKKPKLSHGSTRVLTANLKDNIGETESGCDSSDCGTSV 180 SK+ KE +E N E K+ K+ H S+R+L++ L D G CG Sbjct: 576 SKDQKKEPMELYNSRNYHEYVSFKRCKIDHASSRLLSSGLTDKSSVAGMGL----CGHLS 631 Query: 181 DQKSSELKSSHRLRCLVLMRSFKNQTPVRPGILLRANSNGKDGTLGKLSCRKIMLEFKSD 360 D S+ + + CL RS V G L + K G L K++LEFKS+ Sbjct: 632 DCSSANKQYPVEIPCLACCRS---GCLVSSGSLYCTEAALKFGAGCNLGALKVLLEFKSE 688 Query: 361 IYNSCQFLHVGGYYVMKY 414 + Q L +GGYY+ K+ Sbjct: 689 SFFKYQLLQIGGYYITKH 706 >emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera] Length = 1618 Score = 57.4 bits (137), Expect = 1e-06 Identities = 43/138 (31%), Positives = 62/138 (44%) Frame = +1 Query: 1 SKENLKEHLECTCRTNSSEDQRHKKPKLSHGSTRVLTANLKDNIGETESGCDSSDCGTSV 180 SK+ KE +E N E K+ K+ H S+R+L++ L D G CG Sbjct: 836 SKDQKKEPMELYNSRNYHEYVSFKRCKIDHASSRLLSSGLTDKSSVAGMGX----CGHLS 891 Query: 181 DQKSSELKSSHRLRCLVLMRSFKNQTPVRPGILLRANSNGKDGTLGKLSCRKIMLEFKSD 360 D S+ + + CL RS V G L + K G L K++LEFKS+ Sbjct: 892 DCSSANKQYPVEIPCLACCRS---GXLVSSGSLYCTEAALKFGAGCXLGALKVLLEFKSE 948 Query: 361 IYNSCQFLHVGGYYVMKY 414 + Q L +GGYY+ K+ Sbjct: 949 SFFKYQLLQIGGYYITKH 966 >ref|XP_002302447.1| predicted protein [Populus trichocarpa] gi|222844173|gb|EEE81720.1| predicted protein [Populus trichocarpa] Length = 502 Score = 55.1 bits (131), Expect = 6e-06 Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 3/129 (2%) Frame = +1 Query: 46 NSSEDQRHKKPKLSHGSTRVLTANLKDN---IGETESGCDSSDCGTSVDQKSSELKSSHR 216 N+ E +KK K+ ++ + L D+ +G S C S S K EL S Sbjct: 140 NNEEYLPNKKCKMDCMPSQDFVSVLVDDQSYVGSELSACSGS-LRESTKWKCGEL-SCPE 197 Query: 217 LRCLVLMRSFKNQTPVRPGILLRANSNGKDGTLGKLSCRKIMLEFKSDIYNSCQFLHVGG 396 + CL + R+ + V G L N K G K S RKI+LEF SD Q L +GG Sbjct: 198 IPCLAIARNANSHNLVSSGKLCCTNCKVKIGADYKPSGRKILLEFSSDSLFRYQMLQIGG 257 Query: 397 YYVMKYGKE 423 YYV+K+ KE Sbjct: 258 YYVIKHRKE 266