BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038276
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22269.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   113   2e-23

>emb|CBI22269.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/85 (65%), Positives = 69/85 (81%)
 Frame = +2

Query: 2   EHYGCMVNLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVGLAEVVINQLVK 181
           EHYGCMV+LLGR G LKEAF LV SMP+EPNAI+WGTLL ACR+H+  GLAE V ++LVK
Sbjct: 364 EHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVK 423

Query: 182 LEASDANAYAILSNVYAAAVNADDF 256
            E SD+   ++LSN+YAAA + D+F
Sbjct: 424 SELSDSGNLSMLSNIYAAAGDWDNF 448


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/85 (65%), Positives = 69/85 (81%)
 Frame = +2

Query: 2   EHYGCMVNLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVGLAEVVINQLVK 181
           EHYGCMV+LLGR G LKEAF LV SMP+EPNAI+WGTLL ACR+H+  GLAE V ++LVK
Sbjct: 449 EHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVK 508

Query: 182 LEASDANAYAILSNVYAAAVNADDF 256
            E SD+   ++LSN+YAAA + D+F
Sbjct: 509 SELSDSGNLSMLSNIYAAAGDWDNF 533


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/79 (68%), Positives = 64/79 (81%)
 Frame = +2

Query: 2   EHYGCMVNLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVGLAEVVINQLVK 181
           EHYGCM++LLGR G+LKEAF L++SMPMEPNAI+ GTLL ACR+HNDV LA  V  QL K
Sbjct: 455 EHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDLARAVCEQLFK 514

Query: 182 LEASDANAYAILSNVYAAA 238
           LE SD   Y++LSN+YA A
Sbjct: 515 LEPSDPGNYSLLSNIYAQA 533


>ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|222848341|gb|EEE85888.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/79 (65%), Positives = 66/79 (83%)
 Frame = +2

Query: 2   EHYGCMVNLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVGLAEVVINQLVK 181
           EHYGCMV+LLGR G LKEA+ LV+SMP+EPN ++WGTLL ACR+HN VGLAE V++ L K
Sbjct: 278 EHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFK 337

Query: 182 LEASDANAYAILSNVYAAA 238
           LE SD   Y++LSN++A+A
Sbjct: 338 LEPSDPGNYSLLSNIFASA 356


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/79 (65%), Positives = 66/79 (83%)
 Frame = +2

Query: 2   EHYGCMVNLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVGLAEVVINQLVK 181
           EHYGCM++LLGR G L+EAF LV+SMPMEPN ++WGTLL ACRVHN V LAE V+++L+ 
Sbjct: 455 EHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLIT 514

Query: 182 LEASDANAYAILSNVYAAA 238
           LE SD   Y++LSN++AAA
Sbjct: 515 LEQSDPGNYSMLSNIFAAA 533