BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038259
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284303.2| PREDICTED: uncharacterized rhomboid protein ...   218   6e-55
emb|CBI19096.3| unnamed protein product [Vitis vinifera]              218   6e-55
ref|XP_003527920.1| PREDICTED: inactive rhomboid protein 1-like ...   191   7e-47
ref|XP_003522595.1| PREDICTED: inactive rhomboid protein 1-like ...   188   4e-46
ref|XP_003601147.1| Rhomboid family member [Medicago truncatula]...   188   5e-46

>ref|XP_002284303.2| PREDICTED: uncharacterized rhomboid protein AN10929-like [Vitis
           vinifera]
          Length = 379

 Score =  218 bits (554), Expect = 6e-55
 Identities = 108/175 (61%), Positives = 135/175 (77%)
 Frame = -2

Query: 525 SSVIFVGVHLEQEFGSWRIGLVYILSAFVGSLTAALFIKNNPAVTSSGALFGLLGAMLSA 346
           SSVIFVG+HLEQEFG  RIG+VYILSAF GSL A LF++ +PAV SSGALFGLLG+MLS 
Sbjct: 138 SSVIFVGIHLEQEFGPLRIGMVYILSAFFGSLVATLFLQKSPAVGSSGALFGLLGSMLSG 197

Query: 345 LIRNWKVYSDKPSALVTLFFLVMVNFSVGFLPHVDNFSNMGGFVSGILLGLVLFFTPQLG 166
           LI NWKVY+DK +AL  L  + ++NF++G LP+VDNFSN+GGF+SG+LLG VL F+P+L 
Sbjct: 198 LICNWKVYTDKLAALSALLLVAVINFALGLLPYVDNFSNLGGFISGVLLGFVLLFSPRLP 257

Query: 165 EVPEHKRGLFEYNRKSSIEFKLKLDKPVTRSISXXXXXXXLAGGLTAVLHGVNAN 1
            + E K G F+Y+ K SI  K KLD+PV RS+S       LAG + AVLHG++ N
Sbjct: 258 RMAEKKGGFFDYSVKKSIRLKQKLDRPVLRSVSFVLFGLVLAGAIVAVLHGIDMN 312


>emb|CBI19096.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  218 bits (554), Expect = 6e-55
 Identities = 108/175 (61%), Positives = 135/175 (77%)
 Frame = -2

Query: 525 SSVIFVGVHLEQEFGSWRIGLVYILSAFVGSLTAALFIKNNPAVTSSGALFGLLGAMLSA 346
           SSVIFVG+HLEQEFG  RIG+VYILSAF GSL A LF++ +PAV SSGALFGLLG+MLS 
Sbjct: 138 SSVIFVGIHLEQEFGPLRIGMVYILSAFFGSLVATLFLQKSPAVGSSGALFGLLGSMLSG 197

Query: 345 LIRNWKVYSDKPSALVTLFFLVMVNFSVGFLPHVDNFSNMGGFVSGILLGLVLFFTPQLG 166
           LI NWKVY+DK +AL  L  + ++NF++G LP+VDNFSN+GGF+SG+LLG VL F+P+L 
Sbjct: 198 LICNWKVYTDKLAALSALLLVAVINFALGLLPYVDNFSNLGGFISGVLLGFVLLFSPRLP 257

Query: 165 EVPEHKRGLFEYNRKSSIEFKLKLDKPVTRSISXXXXXXXLAGGLTAVLHGVNAN 1
            + E K G F+Y+ K SI  K KLD+PV RS+S       LAG + AVLHG++ N
Sbjct: 258 RMAEKKGGFFDYSVKKSIRLKQKLDRPVLRSVSFVLFGLVLAGAIVAVLHGIDMN 312


>ref|XP_003527920.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
          Length = 373

 Score =  191 bits (484), Expect = 7e-47
 Identities = 100/177 (56%), Positives = 129/177 (72%), Gaps = 2/177 (1%)
 Frame = -2

Query: 525 SSVIFVGVHLEQEFGSWRIGLVYILSAFVGSLTAALFIKNNPAVTSSGALFGLLGAMLSA 346
           SSVI+VGV LE  FG  RIG++Y LSAFVGSL A+LF++N PAV +SGAL+GLLG +LS 
Sbjct: 131 SSVIYVGVSLEHHFGPIRIGIIYALSAFVGSLVASLFLQNMPAVGASGALYGLLGTLLSE 190

Query: 345 LIRNWKVYSDKPSALVTLFFLVMVNFSVGFLPHVDNFSNMGGFVSGILLGLVLFFTPQLG 166
           L+ NWK +S+K SA+ +L F+ + NF +GFLP+VDNF+++GGF+SG LLG V   +PQL 
Sbjct: 191 LVWNWKFHSNKISAIASLVFVFVCNFVLGFLPYVDNFASIGGFISGFLLGSVFLLSPQLQ 250

Query: 165 EVPEHKRGLFEYNRKSSIEFKL--KLDKPVTRSISXXXXXXXLAGGLTAVLHGVNAN 1
            V  +K GL +Y  KS I+ KL  KLD+PV R +S       LAG L AVLHG+N N
Sbjct: 251 PVAPNKGGLIDYGVKSCIKLKLKQKLDRPVLRIVSLILFSLLLAGCLVAVLHGININ 307


>ref|XP_003522595.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
          Length = 368

 Score =  188 bits (478), Expect = 4e-46
 Identities = 98/175 (56%), Positives = 128/175 (73%), Gaps = 2/175 (1%)
 Frame = -2

Query: 525 SSVIFVGVHLEQEFGSWRIGLVYILSAFVGSLTAALFIKNNPAVTSSGALFGLLGAMLSA 346
           SSVI+VGV+LE  FG  RIG++Y LSAFVGSL A+LF++N PAV +SGAL+GLLG +LS 
Sbjct: 126 SSVIYVGVNLEHHFGPIRIGIIYALSAFVGSLVASLFLQNIPAVGASGALYGLLGTLLSE 185

Query: 345 LIRNWKVYSDKPSALVTLFFLVMVNFSVGFLPHVDNFSNMGGFVSGILLGLVLFFTPQLG 166
           L+ NWK +S+K SA+ +L F+ + NF +GFLP+VDNF++MGGF+SG LLG V    PQ+ 
Sbjct: 186 LVWNWKFHSNKISAIASLVFVFVCNFVLGFLPYVDNFASMGGFISGFLLGSVFLLCPQIQ 245

Query: 165 EVPEHKRGLFEYNRKSSIEFKL--KLDKPVTRSISXXXXXXXLAGGLTAVLHGVN 7
            V  +K GL +Y  KS ++ KL  KLD+PV R +S       LAG L AVLHG+N
Sbjct: 246 PVAPNKGGLIDYGVKSYVKLKLKEKLDRPVLRIVSLILFSLLLAGCLVAVLHGIN 300


>ref|XP_003601147.1| Rhomboid family member [Medicago truncatula]
           gi|355490195|gb|AES71398.1| Rhomboid family member
           [Medicago truncatula]
          Length = 332

 Score =  188 bits (477), Expect = 5e-46
 Identities = 99/176 (56%), Positives = 128/176 (72%), Gaps = 2/176 (1%)
 Frame = -2

Query: 522 SVIFVGVHLEQEFGSWRIGLVYILSAFVGSLTAALFIKNNPAVTSSGALFGLLGAMLSAL 343
           SVI+VG+ LEQEFG  RIG+VYILSAFVG+L A+LF++N P V SSGALFGLLGA+LS L
Sbjct: 91  SVIYVGIRLEQEFGPLRIGIVYILSAFVGALMASLFLQNIPVVGSSGALFGLLGALLSEL 150

Query: 342 IRNWKVYSDKPSALVTLFFLVMVNFSVGFLPHVDNFSNMGGFVSGILLGLVLFFTPQLGE 163
           + NWK ++ K S + +  F+ + NF +GFLP+VDNFS++GGF+SG LLG VL F PQ  +
Sbjct: 151 VWNWKYHTKKISEVASFVFIFVCNFLLGFLPYVDNFSSIGGFISGFLLGTVLLFAPQFQQ 210

Query: 162 VPEHKRGLFEYNRKSSIEFKL--KLDKPVTRSISXXXXXXXLAGGLTAVLHGVNAN 1
           V   K    +Y+ KS I+ KL  KLD+PV+R +S       LAG L AVL+G+N N
Sbjct: 211 VTPSKGDQIDYDLKSYIKLKLKQKLDRPVSRIVSLILFTLLLAGCLLAVLYGININ 266